RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 TATP17735 454 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-202ENST00000369984 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
HCFC1-202ENST00000369984 TOP1P11387 765 aaKnown RBP14.48□□□□□ -0.09
HCFC1-202ENST00000369984 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 KIF4BQ2VIQ3 1234 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
HCFC1-202ENST00000369984 FAM107BQ9H098 131 aa14.47□□□□□ -0.09
HCFC1-202ENST00000369984 URI1O94763 535 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-202ENST00000369984 ANO10Q9NW15 660 aa14.47□□□□□ -0.09
HCFC1-202ENST00000369984 ANKRD50Q9ULJ7 1429 aa14.47□□□□□ -0.09
HCFC1-202ENST00000369984 BTBD11A6QL63 1104 aa14.47□□□□□ -0.09
HCFC1-202ENST00000369984 CTNNBL1Q8WYA6 563 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-202ENST00000369984 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
HCFC1-202ENST00000369984 ZHX1Q9UKY1 873 aaPredicted RBP14.46□□□□□ -0.09
HCFC1-202ENST00000369984 FGFR1OPO95684 399 aaKnown RBP14.46□□□□□ -0.09
HCFC1-202ENST00000369984 CCDC175P0C221 793 aa14.46□□□□□ -0.09
HCFC1-202ENST00000369984 DNA2P51530 1060 aa14.46□□□□□ -0.09
HCFC1-202ENST00000369984 TMX1Q9H3N1 280 aa14.46□□□□□ -0.09
HCFC1-202ENST00000369984 TNIP1Q15025 636 aa14.46□□□□□ -0.1
HCFC1-202ENST00000369984 AIDAQ96BJ3 306 aa14.46□□□□□ -0.1
HCFC1-202ENST00000369984 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 HOOK3Q86VS8 718 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 CCDC150Q8NCX0 1101 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
HCFC1-202ENST00000369984 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 SMC1AQ14683 1233 aaKnown RBP14.45□□□□□ -0.1
HCFC1-202ENST00000369984 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
HCFC1-202ENST00000369984 C16orf45Q96MC5 204 aaPredicted RBP14.45□□□□□ -0.1
HCFC1-202ENST00000369984 TAOK3Q9H2K8 898 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 ZWINTO95229 277 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 CCDC83Q8IWF9 413 aa14.45□□□□□ -0.1
HCFC1-202ENST00000369984 GTF2A1P52655 376 aaPredicted RBP14.44□□□□□ -0.1
HCFC1-202ENST00000369984 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 IDH1O75874 414 aaKnown RBP14.44□□□□□ -0.1
HCFC1-202ENST00000369984 LARP1Q6PKG0 1096 aaKnown RBP14.44□□□□□ -0.1
HCFC1-202ENST00000369984 PLEKHH1Q9ULM0 1364 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 USO1O60763 962 aaKnown RBP14.44□□□□□ -0.1
HCFC1-202ENST00000369984 PRAM1Q96QH2 718 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 PAFAH1B1P43034 410 aa14.44□□□□□ -0.1
HCFC1-202ENST00000369984 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
HCFC1-202ENST00000369984 ZNF287Q9HBT7 754 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 TRMT1Q9NXH9 659 aaKnown RBP14.43□□□□□ -0.1
HCFC1-202ENST00000369984 MACROD2A1Z1Q3 448 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 SPECC1Q5M775 1068 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 IL1RAPL2Q9NP60 686 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 SERPINA10Q9UK55 444 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
HCFC1-202ENST00000369984 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
HCFC1-202ENST00000369984 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 HLTFQ14527 1009 aaKnown RBP eCLIP14.42□□□□□ -0.1
HCFC1-202ENST00000369984 PPP4R3AQ6IN85 833 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 NCOA2Q15596 1464 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 CEP126Q9P2H0 1117 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 PPP4R3BQ5MIZ7 849 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 NAA15Q9BXJ9 866 aaKnown RBP14.42□□□□□ -0.1
HCFC1-202ENST00000369984 CTNNA2P26232 953 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
HCFC1-202ENST00000369984 SCAND2PQ9GZW5 306 aaPredicted RBP14.42□□□□□ -0.1
HCFC1-202ENST00000369984 CTAGE5O15320 804 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 XPCQ01831 940 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-202ENST00000369984 GIGYF2Q6Y7W6 1299 aaKnown RBP14.41□□□□□ -0.1
HCFC1-202ENST00000369984 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 ERBINQ96RT1 1412 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-202ENST00000369984 C8orf76Q96K31 380 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 CFAP65Q6ZU64 1925 aaKnown RBP14.41□□□□□ -0.1
HCFC1-202ENST00000369984 ZNF530Q6P9A1 599 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-202ENST00000369984 DAAM2Q86T65 1068 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
HCFC1-202ENST00000369984 IGHMBP2P38935 993 aaKnown RBP14.4□□□□□ -0.1
HCFC1-202ENST00000369984 ABCF2Q9UG63 623 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 CCDC160A6NGH7 325 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 PHAXQ9H814 394 aaKnown RBP14.4□□□□□ -0.1
HCFC1-202ENST00000369984 HECW1Q76N89 1606 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 YEATS4O95619 227 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 TDRD12Q587J7 1177 aaKnown RBP14.4□□□□□ -0.1
HCFC1-202ENST00000369984 CNNM3Q8NE01 707 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 MNAT1P51948 309 aa14.4□□□□□ -0.1
HCFC1-202ENST00000369984 GTF2F1P35269 517 aaKnown RBP eCLIP14.4□□□□□ -0.1
HCFC1-202ENST00000369984 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
HCFC1-202ENST00000369984 RAB34Q9BZG1 259 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 RAB11FIP3O75154 756 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 BMS1Q14692 1282 aaKnown RBP14.39□□□□□ -0.11
HCFC1-202ENST00000369984 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 SMARCC1Q92922 1105 aaPredicted RBP14.39□□□□□ -0.11
HCFC1-202ENST00000369984 GSDMDP57764 484 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 SPECC1LQ69YQ0 1117 aa14.39□□□□□ -0.11
HCFC1-202ENST00000369984 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms