RNA–Protein interactions for RNA: ENST00000369387.4

H3F3AP4-201, Transcript of H3 histone, family 3A, pseudogene 4, humanhuman

BASIC

Gene H3F3AP4, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP4-201ENST00000369387 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
H3F3AP4-201ENST00000369387 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
H3F3AP4-201ENST00000369387 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
H3F3AP4-201ENST00000369387 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
H3F3AP4-201ENST00000369387 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
H3F3AP4-201ENST00000369387 CYP27B1O15528 508 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 HOXB7P09629 217 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 EIF4A1P60842 406 aaKnown RBP12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 TMEM57Q8N5G2 664 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
H3F3AP4-201ENST00000369387 MRC1P22897 1456 aa12.21□□□□□ -0.46
H3F3AP4-201ENST00000369387 ABCC4O15439 1325 aa12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 PTPRCP08575 1304 aa12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
H3F3AP4-201ENST00000369387 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
H3F3AP4-201ENST00000369387 KCNQ3O43525 872 aa12.19□□□□□ -0.46
H3F3AP4-201ENST00000369387 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
H3F3AP4-201ENST00000369387 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 RGS12O14924 1447 aa12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 JCADQ9P266 1359 aa12.18□□□□□ -0.46
H3F3AP4-201ENST00000369387 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
H3F3AP4-201ENST00000369387 CABP4P57796 275 aa12.16□□□□□ -0.46
H3F3AP4-201ENST00000369387 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
H3F3AP4-201ENST00000369387 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
H3F3AP4-201ENST00000369387 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
H3F3AP4-201ENST00000369387 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 G2E3Q7L622 706 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 RWDD1Q9H446 243 aaPredicted RBP12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 ZBTB40Q9NUA8 1239 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
H3F3AP4-201ENST00000369387 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 IGHDP01880 384 aa12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 FLIIQ13045 1269 aa12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 SLIT2O94813 1529 aa12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 CACNA1FO60840 1977 aa12.14□□□□□ -0.47
H3F3AP4-201ENST00000369387 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
H3F3AP4-201ENST00000369387 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
H3F3AP4-201ENST00000369387 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 EXOC5O00471 708 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
H3F3AP4-201ENST00000369387 C5P01031 1676 aa12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 F6X3S4 739 aa12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 TOGARAM1Q9Y4F4 1720 aa12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 LRP6O75581 1613 aa12.1□□□□□ -0.47
H3F3AP4-201ENST00000369387 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 BARGINQ6ZT62 677 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 NGLY1Q96IV0 654 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
H3F3AP4-201ENST00000369387 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
H3F3AP4-201ENST00000369387 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
H3F3AP4-201ENST00000369387 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
H3F3AP4-201ENST00000369387 GLI3P10071 1580 aa12.08□□□□□ -0.48
H3F3AP4-201ENST00000369387 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
H3F3AP4-201ENST00000369387 ANXA1P04083 346 aa12.07□□□□□ -0.48
H3F3AP4-201ENST00000369387 HSPA1LP34931 641 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms