RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 HSP90AB2PQ58FF8 381 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
SNX27-201ENST00000368838 MTFR1LQ9H019 292 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
SNX27-201ENST00000368838 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
SNX27-201ENST00000368838 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
SNX27-201ENST00000368838 UTRNP46939 3433 aa11.75□□□□□ -0.53
SNX27-201ENST00000368838 PKD1L3Q7Z443 1732 aa11.74□□□□□ -0.53
SNX27-201ENST00000368838 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
SNX27-201ENST00000368838 NGEFQ8N5V2 710 aa11.74□□□□□ -0.53
SNX27-201ENST00000368838 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
SNX27-201ENST00000368838 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
SNX27-201ENST00000368838 RTL1A6NKG5 1358 aa11.73□□□□□ -0.53
SNX27-201ENST00000368838 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
SNX27-201ENST00000368838 PPM1GO15355 546 aaPredicted RBP11.73□□□□□ -0.53
SNX27-201ENST00000368838 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
SNX27-201ENST00000368838 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
SNX27-201ENST00000368838 ARXQ96QS3 562 aa11.73□□□□□ -0.53
SNX27-201ENST00000368838 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
SNX27-201ENST00000368838 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
SNX27-201ENST00000368838 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
SNX27-201ENST00000368838 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
SNX27-201ENST00000368838 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
SNX27-201ENST00000368838 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
SNX27-201ENST00000368838 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
SNX27-201ENST00000368838 FLT4P35916 1363 aa11.71□□□□□ -0.54
SNX27-201ENST00000368838 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
SNX27-201ENST00000368838 MORC1Q86VD1 984 aa11.7□□□□□ -0.54
SNX27-201ENST00000368838 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
SNX27-201ENST00000368838 TNNT2P45379 298 aaPredicted RBP11.69□□□□□ -0.54
SNX27-201ENST00000368838 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
SNX27-201ENST00000368838 MPRIPQ6WCQ1 1025 aa11.69□□□□□ -0.54
SNX27-201ENST00000368838 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
SNX27-201ENST00000368838 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
SNX27-201ENST00000368838 PCDH11XQ9BZA7 1347 aa11.68□□□□□ -0.54
SNX27-201ENST00000368838 PCDH11YQ9BZA8 1340 aa11.68□□□□□ -0.54
SNX27-201ENST00000368838 CYP27B1O15528 508 aa11.67□□□□□ -0.54
SNX27-201ENST00000368838 POLD1P28340 1107 aa11.67□□□□□ -0.54
SNX27-201ENST00000368838 SMIM5Q71RC9 77 aa11.67□□□□□ -0.54
SNX27-201ENST00000368838 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
SNX27-201ENST00000368838 NLGN2Q8NFZ4 835 aa11.67□□□□□ -0.54
SNX27-201ENST00000368838 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
SNX27-201ENST00000368838 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
SNX27-201ENST00000368838 GPR162Q16538 588 aa11.66□□□□□ -0.54
SNX27-201ENST00000368838 PALLDQ8WX93 1383 aa11.65□□□□□ -0.54
SNX27-201ENST00000368838 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
SNX27-201ENST00000368838 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
SNX27-201ENST00000368838 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
SNX27-201ENST00000368838 SLC16A10Q8TF71 515 aa11.64□□□□□ -0.55
SNX27-201ENST00000368838 EYA1Q99502 592 aa11.64□□□□□ -0.55
SNX27-201ENST00000368838 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
SNX27-201ENST00000368838 COL3A1P02461 1466 aaPredicted RBP11.64□□□□□ -0.55
SNX27-201ENST00000368838 MAP3K5Q99683 1374 aa11.64□□□□□ -0.55
SNX27-201ENST00000368838 HNRNPUQ00839 825 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNX27-201ENST00000368838 AMIGO3Q86WK7 504 aa11.63□□□□□ -0.55
SNX27-201ENST00000368838 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
SNX27-201ENST00000368838 PHF14O94880 888 aa11.62□□□□□ -0.55
SNX27-201ENST00000368838 MTHFSP49914 203 aa11.62□□□□□ -0.55
SNX27-201ENST00000368838 PIGBQ92521 554 aa11.62□□□□□ -0.55
SNX27-201ENST00000368838 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
SNX27-201ENST00000368838 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
SNX27-201ENST00000368838 NCAPD2Q15021 1401 aa11.62□□□□□ -0.55
SNX27-201ENST00000368838 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
SNX27-201ENST00000368838 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
SNX27-201ENST00000368838 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
SNX27-201ENST00000368838 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
SNX27-201ENST00000368838 COL5A3P25940 1745 aaPredicted RBP11.61□□□□□ -0.55
SNX27-201ENST00000368838 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.552e-7■■□□□ 13.3
SNX27-201ENST00000368838 EIF4A2Q14240 407 aaKnown RBP11.6□□□□□ -0.55
SNX27-201ENST00000368838 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX27-201ENST00000368838 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 AK7Q96M32 723 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
SNX27-201ENST00000368838 TMOD3Q9NYL9 352 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 ASAP1Q9ULH1 1129 aa11.6□□□□□ -0.55
SNX27-201ENST00000368838 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
SNX27-201ENST00000368838 SCN11AQ9UI33 1791 aa11.59□□□□□ -0.55
SNX27-201ENST00000368838 PHKG2P15735 406 aa11.59□□□□□ -0.55
SNX27-201ENST00000368838 CCDC27Q2M243 656 aa11.59□□□□□ -0.55
SNX27-201ENST00000368838 HS6ST3Q8IZP7 471 aa11.59□□□□□ -0.55
SNX27-201ENST00000368838 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
SNX27-201ENST00000368838 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
SNX27-201ENST00000368838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
SNX27-201ENST00000368838 LOC102724428A0A0B4J2F2 783 aa11.58□□□□□ -0.56
SNX27-201ENST00000368838 SIK1P57059 783 aa11.58□□□□□ -0.56
SNX27-201ENST00000368838 ITPK1Q13572 414 aa11.58□□□□□ -0.56
SNX27-201ENST00000368838 ATP6V1AP38606 617 aa11.57□□□□□ -0.56
SNX27-201ENST00000368838 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
SNX27-201ENST00000368838 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SNX27-201ENST00000368838 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
SNX27-201ENST00000368838 KIAA1551Q9HCM1 1747 aa11.56□□□□□ -0.56
SNX27-201ENST00000368838 GNPATO15228 680 aa11.56□□□□□ -0.56
SNX27-201ENST00000368838 FCHSD2O94868 740 aa11.56□□□□□ -0.56
SNX27-201ENST00000368838 ATG3Q9NT62 314 aa11.56□□□□□ -0.56
SNX27-201ENST00000368838 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
SNX27-201ENST00000368838 TJP1Q07157 1748 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms