RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 FTSJ3Q8IY81 847 aaKnown RBP24.88■■□□□ 1.57
CHTOP-204ENST00000368694 TNNQ9UQP3 1299 aa24.88■■□□□ 1.57
CHTOP-204ENST00000368694 IPO8O15397 1037 aaKnown RBP24.87■■□□□ 1.57
CHTOP-204ENST00000368694 MRPL50Q8N5N7 158 aaKnown RBP24.87■■□□□ 1.57
CHTOP-204ENST00000368694 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
CHTOP-204ENST00000368694 BRPF1P55201 1214 aaPredicted RBP24.87■■□□□ 1.57
CHTOP-204ENST00000368694 ATF7IPQ6VMQ6 1270 aa24.86■■□□□ 1.57
CHTOP-204ENST00000368694 COG6Q9Y2V7 657 aa24.86■■□□□ 1.57
CHTOP-204ENST00000368694 WNK3Q9BYP7 1800 aa24.86■■□□□ 1.57
CHTOP-204ENST00000368694 MS4A1P11836 297 aa24.85■■□□□ 1.57
CHTOP-204ENST00000368694 TRIM27P14373 513 aa24.85■■□□□ 1.57
CHTOP-204ENST00000368694 TSHZ2Q9NRE2 1034 aa24.85■■□□□ 1.57
CHTOP-204ENST00000368694 RLBP1P12271 317 aa24.85■■□□□ 1.57
CHTOP-204ENST00000368694 DZIP1LQ8IYY4 767 aaKnown RBP24.85■■□□□ 1.57
CHTOP-204ENST00000368694 DDX54Q8TDD1 881 aaKnown RBP24.84■■□□□ 1.57
CHTOP-204ENST00000368694 SLC52A2Q9HAB3 445 aa24.84■■□□□ 1.57
CHTOP-204ENST00000368694 SLIT2O94813 1529 aa24.83■■□□□ 1.57
CHTOP-204ENST00000368694 HSPA1LP34931 641 aa24.82■■□□□ 1.56
CHTOP-204ENST00000368694 C8orf37Q96NL8 207 aa24.82■■□□□ 1.56
CHTOP-204ENST00000368694 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
CHTOP-204ENST00000368694 KCNQ3O43525 872 aa24.82■■□□□ 1.56
CHTOP-204ENST00000368694 EIF4A1P60842 406 aaKnown RBP24.82■■□□□ 1.56
CHTOP-204ENST00000368694 MRC1P22897 1456 aa24.81■■□□□ 1.56
CHTOP-204ENST00000368694 NFATC2IPQ8NCF5 419 aa24.81■■□□□ 1.56
CHTOP-204ENST00000368694 SOS1Q07889 1333 aaPredicted RBP24.81■■□□□ 1.56
CHTOP-204ENST00000368694 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
CHTOP-204ENST00000368694 NGLY1Q96IV0 654 aa24.8■■□□□ 1.56
CHTOP-204ENST00000368694 CCDC9Q9Y3X0 531 aaKnown RBP24.8■■□□□ 1.56
CHTOP-204ENST00000368694 STK31Q9BXU1 1019 aa24.79■■□□□ 1.56
CHTOP-204ENST00000368694 SPATA31A1Q5TZJ5 1347 aa24.79■■□□□ 1.56
CHTOP-204ENST00000368694 CABP4P57796 275 aa24.78■■□□□ 1.56
CHTOP-204ENST00000368694 CCDC30Q5VVM6 783 aa24.78■■□□□ 1.56
CHTOP-204ENST00000368694 ARHGAP45Q92619 1136 aa24.78■■□□□ 1.56
CHTOP-204ENST00000368694 NECTIN2Q92692 538 aa24.78■■□□□ 1.56
CHTOP-204ENST00000368694 LRP6O75581 1613 aa24.78■■□□□ 1.56
CHTOP-204ENST00000368694 SLC4A2P04920 1241 aa24.77■■□□□ 1.56
CHTOP-204ENST00000368694 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
CHTOP-204ENST00000368694 ITPRIPQ8IWB1 547 aa24.76■■□□□ 1.55
CHTOP-204ENST00000368694 THRAP3Q9Y2W1 955 aaKnown RBP24.76■■□□□ 1.55
CHTOP-204ENST00000368694 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
CHTOP-204ENST00000368694 SLC39A6Q13433 755 aa24.76■■□□□ 1.55
CHTOP-204ENST00000368694 NKX1-1Q15270 411 aaPredicted RBP24.76■■□□□ 1.55
CHTOP-204ENST00000368694 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
CHTOP-204ENST00000368694 ZNF790Q6PG37 636 aa24.75■■□□□ 1.55
CHTOP-204ENST00000368694 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
CHTOP-204ENST00000368694 SPATA31A5Q5VU36 1347 aa24.74■■□□□ 1.55
CHTOP-204ENST00000368694 SPATA31A7Q8IWB4 1347 aa24.74■■□□□ 1.55
CHTOP-204ENST00000368694 HOXB7P09629 217 aa24.74■■□□□ 1.55
CHTOP-204ENST00000368694 TMEM57Q8N5G2 664 aa24.74■■□□□ 1.55
CHTOP-204ENST00000368694 API5Q9BZZ5 524 aaKnown RBP24.74■■□□□ 1.55
CHTOP-204ENST00000368694 EXOC5O00471 708 aa24.73■■□□□ 1.55
CHTOP-204ENST00000368694 EIF2S2P20042 333 aaKnown RBP24.73■■□□□ 1.55
CHTOP-204ENST00000368694 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
CHTOP-204ENST00000368694 CDCA7Q9BWT1 371 aaPredicted RBP24.73■■□□□ 1.55
CHTOP-204ENST00000368694 TOGARAM1Q9Y4F4 1720 aa24.73■■□□□ 1.55
CHTOP-204ENST00000368694 ERVV-2B6SEH9 535 aa24.73■■□□□ 1.55
CHTOP-204ENST00000368694 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
CHTOP-204ENST00000368694 TNS2Q63HR2 1409 aa24.72■■□□□ 1.55
CHTOP-204ENST00000368694 PTPRCP08575 1304 aa24.72■■□□□ 1.55
CHTOP-204ENST00000368694 BCL9LQ86UU0 1499 aa24.71■■□□□ 1.55
CHTOP-204ENST00000368694 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
CHTOP-204ENST00000368694 DDX19BQ9UMR2 479 aa24.71■■□□□ 1.55
CHTOP-204ENST00000368694 GIGYF1O75420 1035 aaPredicted RBP24.7■■□□□ 1.54
CHTOP-204ENST00000368694 ABCC4O15439 1325 aa24.7■■□□□ 1.54
CHTOP-204ENST00000368694 AAMPQ13685 434 aa24.7■■□□□ 1.54
CHTOP-204ENST00000368694 HEG1Q9ULI3 1381 aa24.69■■□□□ 1.54
CHTOP-204ENST00000368694 C5P01031 1676 aa24.69■■□□□ 1.54
CHTOP-204ENST00000368694 FNBP4Q8N3X1 1017 aaPredicted RBP24.69■■□□□ 1.54
CHTOP-204ENST00000368694 DDB1Q16531 1140 aa24.68■■□□□ 1.54
CHTOP-204ENST00000368694 G2E3Q7L622 706 aa24.68■■□□□ 1.54
CHTOP-204ENST00000368694 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.68■■□□□ 1.54
CHTOP-204ENST00000368694 USP21Q9UK80 565 aa24.68■■□□□ 1.54
CHTOP-204ENST00000368694 RGS12O14924 1447 aa24.67■■□□□ 1.54
CHTOP-204ENST00000368694 PRAMEF22A3QJZ6 481 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 VPS72Q15906 364 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 BARGINQ6ZT62 677 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 ZNF496Q96IT1 587 aaPredicted RBP24.66■■□□□ 1.54
CHTOP-204ENST00000368694 ITGB4P16144 1822 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 KAT6BQ8WYB5 2073 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 FLIIQ13045 1269 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 PAPPAQ13219 1627 aa24.66■■□□□ 1.54
CHTOP-204ENST00000368694 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
CHTOP-204ENST00000368694 ANP32EQ9BTT0 268 aa24.65■■□□□ 1.54
CHTOP-204ENST00000368694 TMOD3Q9NYL9 352 aa24.65■■□□□ 1.54
CHTOP-204ENST00000368694 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
CHTOP-204ENST00000368694 UBR2Q8IWV8 1755 aa24.64■■□□□ 1.54
CHTOP-204ENST00000368694 FAM98CQ17RN3 349 aaKnown RBP24.63■■□□□ 1.53
CHTOP-204ENST00000368694 DBF4Q9UBU7 674 aaPredicted RBP24.62■■□□□ 1.53
CHTOP-204ENST00000368694 DOT1LQ8TEK3 1739 aa24.62■■□□□ 1.53
CHTOP-204ENST00000368694 SNRPA1P09661 255 aaKnown RBP24.62■■□□□ 1.53
CHTOP-204ENST00000368694 PHAXQ9H814 394 aaKnown RBP24.61■■□□□ 1.53
CHTOP-204ENST00000368694 F6X3S4 739 aa24.6■■□□□ 1.53
CHTOP-204ENST00000368694 SLC4A10Q6U841 1118 aa24.6■■□□□ 1.53
CHTOP-204ENST00000368694 CHMP4BQ9H444 224 aaKnown RBP24.6■■□□□ 1.53
CHTOP-204ENST00000368694 LAMB4A4D0S4 1761 aa24.6■■□□□ 1.53
CHTOP-204ENST00000368694 AFF2P51816 1311 aa24.6■■□□□ 1.53
CHTOP-204ENST00000368694 ANXA1P04083 346 aa24.6■■□□□ 1.53
CHTOP-204ENST00000368694 CENPQQ7L2Z9 268 aaPredicted RBP24.6■■□□□ 1.53
CHTOP-204ENST00000368694 GLI3P10071 1580 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms