RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 AMOTQ4VCS5 1084 aa24.02■■□□□ 1.44
C1orf43-204ENST00000368518 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
C1orf43-204ENST00000368518 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
C1orf43-204ENST00000368518 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
C1orf43-204ENST00000368518 UBR3Q6ZT12 1888 aa24.01■■□□□ 1.43
C1orf43-204ENST00000368518 ERVV-2B6SEH9 535 aa24.01■■□□□ 1.43
C1orf43-204ENST00000368518 IL13P35225 146 aa24.01■■□□□ 1.43
C1orf43-204ENST00000368518 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
C1orf43-204ENST00000368518 GNPATO15228 680 aa24■■□□□ 1.43
C1orf43-204ENST00000368518 CC2D1BQ5T0F9 858 aaKnown RBP24■■□□□ 1.43
C1orf43-204ENST00000368518 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
C1orf43-204ENST00000368518 MTHFSP49914 203 aa23.99■■□□□ 1.43
C1orf43-204ENST00000368518 CABP4P57796 275 aa23.99■■□□□ 1.43
C1orf43-204ENST00000368518 C1orf141Q5JVX7 400 aa23.99■■□□□ 1.43
C1orf43-204ENST00000368518 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
C1orf43-204ENST00000368518 CHD4Q14839 1912 aa23.98■■□□□ 1.43
C1orf43-204ENST00000368518 SSFA2P28290 1259 aa23.97■■□□□ 1.43
C1orf43-204ENST00000368518 ZNF784Q8NCA9 323 aaPredicted RBP23.97■■□□□ 1.43
C1orf43-204ENST00000368518 PER1O15534 1290 aaPredicted RBP23.96■■□□□ 1.43
C1orf43-204ENST00000368518 SLC4A9Q96Q91 983 aa23.96■■□□□ 1.43
C1orf43-204ENST00000368518 KDRP35968 1356 aa23.94■■□□□ 1.42
C1orf43-204ENST00000368518 HMOX1P09601 288 aa23.94■■□□□ 1.42
C1orf43-204ENST00000368518 YBX3P16989 372 aaKnown RBP eCLIP23.93■■□□□ 1.423e-7■□□□□ 11.2
C1orf43-204ENST00000368518 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
C1orf43-204ENST00000368518 CD2APQ9Y5K6 639 aa23.92■■□□□ 1.42
C1orf43-204ENST00000368518 PTCD1O75127 700 aaKnown RBP23.91■■□□□ 1.42
C1orf43-204ENST00000368518 RTCBQ9Y3I0 505 aaKnown RBP23.9■■□□□ 1.42
C1orf43-204ENST00000368518 DIAPH1O60610 1272 aaKnown RBP23.89■■□□□ 1.41
C1orf43-204ENST00000368518 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
C1orf43-204ENST00000368518 WWC3Q9ULE0 1092 aa23.88■■□□□ 1.41
C1orf43-204ENST00000368518 GRIN3BO60391 1043 aa23.87■■□□□ 1.41
C1orf43-204ENST00000368518 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
C1orf43-204ENST00000368518 LGR6Q9HBX8 967 aa23.87■■□□□ 1.41
C1orf43-204ENST00000368518 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
C1orf43-204ENST00000368518 ZNF831Q5JPB2 1677 aa23.86■■□□□ 1.41
C1orf43-204ENST00000368518 SCN11AQ9UI33 1791 aa23.86■■□□□ 1.41
C1orf43-204ENST00000368518 RC3H1Q5TC82 1133 aaKnown RBP23.86■■□□□ 1.41
C1orf43-204ENST00000368518 MMP10P09238 476 aa23.85■■□□□ 1.41
C1orf43-204ENST00000368518 ARHGEF1Q92888 912 aaKnown RBP23.85■■□□□ 1.41
C1orf43-204ENST00000368518 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
C1orf43-204ENST00000368518 RPS6KA4O75676 772 aa23.83■■□□□ 1.41
C1orf43-204ENST00000368518 MTHFSDQ2M296 383 aaKnown RBP23.83■■□□□ 1.41
C1orf43-204ENST00000368518 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
C1orf43-204ENST00000368518 RNMTO43148 476 aaKnown RBP23.82■■□□□ 1.4
C1orf43-204ENST00000368518 RFC4P35249 363 aa23.82■■□□□ 1.4
C1orf43-204ENST00000368518 CRKLP46109 303 aaKnown RBP23.82■■□□□ 1.4
C1orf43-204ENST00000368518 SLC52A2Q9HAB3 445 aa23.82■■□□□ 1.4
C1orf43-204ENST00000368518 MYH14Q7Z406 1995 aaKnown RBP23.82■■□□□ 1.4
C1orf43-204ENST00000368518 ADRA2BP18089 450 aa23.81■■□□□ 1.4
C1orf43-204ENST00000368518 NPC1L1Q9UHC9 1359 aa23.8■■□□□ 1.4
C1orf43-204ENST00000368518 NLGN1Q8N2Q7 840 aa23.8■■□□□ 1.4
C1orf43-204ENST00000368518 TJP1Q07157 1748 aa23.79■■□□□ 1.4
C1orf43-204ENST00000368518 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
C1orf43-204ENST00000368518 COL3A1P02461 1466 aaPredicted RBP23.79■■□□□ 1.4
C1orf43-204ENST00000368518 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
C1orf43-204ENST00000368518 GYS1P13807 737 aa23.78■■□□□ 1.4
C1orf43-204ENST00000368518 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
C1orf43-204ENST00000368518 DNAJC10Q8IXB1 793 aa23.77■■□□□ 1.4
C1orf43-204ENST00000368518 C4AP0C0L4 1744 aa23.76■■□□□ 1.39
C1orf43-204ENST00000368518 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
C1orf43-204ENST00000368518 MRC1P22897 1456 aa23.75■■□□□ 1.39
C1orf43-204ENST00000368518 INTS5Q6P9B9 1019 aaKnown RBP23.74■■□□□ 1.39
C1orf43-204ENST00000368518 PARP3Q9Y6F1 533 aa23.74■■□□□ 1.39
C1orf43-204ENST00000368518 A0A0G2JLW4 131 aa23.72■■□□□ 1.39
C1orf43-204ENST00000368518 CCDC87Q9NVE4 849 aa23.72■■□□□ 1.39
C1orf43-204ENST00000368518 N4BP2Q86UW6 1770 aaPredicted RBP23.72■■□□□ 1.39
C1orf43-204ENST00000368518 PXDNLA1KZ92 1463 aa23.71■■□□□ 1.39
C1orf43-204ENST00000368518 FKBP8Q14318 412 aa23.71■■□□□ 1.39
C1orf43-204ENST00000368518 ADAMTS7Q9UKP4 1686 aa23.7■■□□□ 1.39
C1orf43-204ENST00000368518 KCPQ6ZWJ8 1503 aa23.7■■□□□ 1.38
C1orf43-204ENST00000368518 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
C1orf43-204ENST00000368518 GIGYF1O75420 1035 aaPredicted RBP23.7■■□□□ 1.38
C1orf43-204ENST00000368518 C1QTNF8P60827 252 aa23.7■■□□□ 1.38
C1orf43-204ENST00000368518 CFAP53Q96M91 514 aa23.7■■□□□ 1.38
C1orf43-204ENST00000368518 KIF13BQ9NQT8 1826 aa23.7■■□□□ 1.38
C1orf43-204ENST00000368518 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
C1orf43-204ENST00000368518 CYP19A1P11511 503 aaPredicted RBP23.69■■□□□ 1.38
C1orf43-204ENST00000368518 TGFB2P61812 414 aa23.69■■□□□ 1.38
C1orf43-204ENST00000368518 ATP10DQ9P241 1426 aa23.68■■□□□ 1.38
C1orf43-204ENST00000368518 GNAT3A8MTJ3 354 aa23.68■■□□□ 1.38
C1orf43-204ENST00000368518 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
C1orf43-204ENST00000368518 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 ZPR1O75312 459 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 DPEP1P16444 411 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 TTC5Q8N0Z6 440 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 IL17REQ8NFR9 667 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
C1orf43-204ENST00000368518 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
C1orf43-204ENST00000368518 PPP2R1AP30153 589 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 DDR1Q08345 913 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 TEFQ10587 303 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 ZNF526Q8TF50 670 aaPredicted RBP23.66■■□□□ 1.38
C1orf43-204ENST00000368518 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
C1orf43-204ENST00000368518 RSPH6AQ9H0K4 717 aa23.64■■□□□ 1.37
C1orf43-204ENST00000368518 NUDCQ9Y266 331 aa23.64■■□□□ 1.37
C1orf43-204ENST00000368518 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
C1orf43-204ENST00000368518 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms