RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 TNNT2P45379 298 aaPredicted RBP25.47■■□□□ 1.67
PBXIP1-201ENST00000368460 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
PBXIP1-201ENST00000368460 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
PBXIP1-201ENST00000368460 ATG3Q9NT62 314 aa25.46■■□□□ 1.67
PBXIP1-201ENST00000368460 POLKQ9UBT6 870 aa25.45■■□□□ 1.66
PBXIP1-201ENST00000368460 BCS1LQ9Y276 419 aa25.44■■□□□ 1.66
PBXIP1-201ENST00000368460 NLGN1Q8N2Q7 840 aa25.43■■□□□ 1.66
PBXIP1-201ENST00000368460 CEP350Q5VT06 3117 aa25.43■■□□□ 1.66
PBXIP1-201ENST00000368460 HSP90AB1P08238 724 aaKnown RBP25.42■■□□□ 1.66
PBXIP1-201ENST00000368460 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
PBXIP1-201ENST00000368460 TGFB2P61812 414 aa25.41■■□□□ 1.66
PBXIP1-201ENST00000368460 CCDC87Q9NVE4 849 aa25.41■■□□□ 1.66
PBXIP1-201ENST00000368460 RFC4P35249 363 aa25.4■■□□□ 1.66
PBXIP1-201ENST00000368460 CICQ96RK0 1608 aaPredicted RBP25.4■■□□□ 1.66
PBXIP1-201ENST00000368460 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
PBXIP1-201ENST00000368460 ADRA2BP18089 450 aa25.39■■□□□ 1.66
PBXIP1-201ENST00000368460 PLEKHO1Q53GL0 409 aaPredicted RBP25.39■■□□□ 1.66
PBXIP1-201ENST00000368460 DCAF5Q96JK2 942 aa25.39■■□□□ 1.66
PBXIP1-201ENST00000368460 PARP3Q9Y6F1 533 aa25.39■■□□□ 1.66
PBXIP1-201ENST00000368460 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.65
PBXIP1-201ENST00000368460 A0A0G2JLW4 131 aa25.38■■□□□ 1.65
PBXIP1-201ENST00000368460 KIF3CO14782 793 aa25.38■■□□□ 1.65
PBXIP1-201ENST00000368460 ARHGAP27Q6ZUM4 889 aa25.38■■□□□ 1.65
PBXIP1-201ENST00000368460 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
PBXIP1-201ENST00000368460 KDRP35968 1356 aa25.37■■□□□ 1.65
PBXIP1-201ENST00000368460 PLEKHG2Q9H7P9 1386 aa25.37■■□□□ 1.65
PBXIP1-201ENST00000368460 CABP4P57796 275 aa25.37■■□□□ 1.65
PBXIP1-201ENST00000368460 ARHGEF1Q92888 912 aaKnown RBP25.37■■□□□ 1.65
PBXIP1-201ENST00000368460 FCHSD2O94868 740 aa25.36■■□□□ 1.65
PBXIP1-201ENST00000368460 RC3H1Q5TC82 1133 aaKnown RBP25.36■■□□□ 1.65
PBXIP1-201ENST00000368460 ZNF530Q6P9A1 599 aaPredicted RBP25.36■■□□□ 1.65
PBXIP1-201ENST00000368460 KIF13BQ9NQT8 1826 aa25.35■■□□□ 1.65
PBXIP1-201ENST00000368460 CNTNAP4Q9C0A0 1308 aa25.35■■□□□ 1.65
PBXIP1-201ENST00000368460 C10orf71Q711Q0 1435 aa25.34■■□□□ 1.65
PBXIP1-201ENST00000368460 RPS6KA4O75676 772 aa25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 DPEP1P16444 411 aa25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 APLP1P51693 650 aa25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 AMOTQ4VCS5 1084 aa25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 C1orf141Q5JVX7 400 aa25.33■■□□□ 1.65
PBXIP1-201ENST00000368460 GYS1P13807 737 aa25.32■■□□□ 1.64
PBXIP1-201ENST00000368460 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
PBXIP1-201ENST00000368460 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
PBXIP1-201ENST00000368460 TOMM70O94826 608 aa25.31■■□□□ 1.64
PBXIP1-201ENST00000368460 MTHFSP49914 203 aa25.31■■□□□ 1.64
PBXIP1-201ENST00000368460 TIMELESSQ9UNS1 1208 aa25.31■■□□□ 1.64
PBXIP1-201ENST00000368460 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
PBXIP1-201ENST00000368460 C16orf71Q8IYS4 520 aaPredicted RBP25.3■■□□□ 1.64
PBXIP1-201ENST00000368460 ZNF831Q5JPB2 1677 aa25.29■■□□□ 1.64
PBXIP1-201ENST00000368460 COL5A3P25940 1745 aaPredicted RBP25.29■■□□□ 1.64
PBXIP1-201ENST00000368460 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
PBXIP1-201ENST00000368460 KDM6AO15550 1401 aaPredicted RBP25.27■■□□□ 1.64
PBXIP1-201ENST00000368460 NMRK2Q9NPI5 230 aa25.26■■□□□ 1.63
PBXIP1-201ENST00000368460 PIM2Q9P1W9 311 aa25.26■■□□□ 1.63
PBXIP1-201ENST00000368460 CRKLP46109 303 aaKnown RBP25.25■■□□□ 1.63
PBXIP1-201ENST00000368460 C9orf131Q5VYM1 1079 aa25.25■■□□□ 1.63
PBXIP1-201ENST00000368460 MORC1Q86VD1 984 aa25.25■■□□□ 1.63
PBXIP1-201ENST00000368460 PANK3Q9H999 370 aa25.25■■□□□ 1.63
PBXIP1-201ENST00000368460 NFATC2IPQ8NCF5 419 aa25.24■■□□□ 1.63
PBXIP1-201ENST00000368460 MYH14Q7Z406 1995 aaKnown RBP25.24■■□□□ 1.63
PBXIP1-201ENST00000368460 DALRD3Q5D0E6 543 aaKnown RBP25.23■■□□□ 1.63
PBXIP1-201ENST00000368460 SRP68Q9UHB9 627 aaKnown RBP25.23■■□□□ 1.63
PBXIP1-201ENST00000368460 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
PBXIP1-201ENST00000368460 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.63
PBXIP1-201ENST00000368460 SULT6B1Q6IMI4 303 aa25.21■■□□□ 1.63
PBXIP1-201ENST00000368460 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
PBXIP1-201ENST00000368460 KDM2BQ8NHM5 1336 aa25.2■■□□□ 1.62
PBXIP1-201ENST00000368460 USP42Q9H9J4 1324 aaKnown RBP25.2■■□□□ 1.62
PBXIP1-201ENST00000368460 FKBP8Q14318 412 aa25.2■■□□□ 1.62
PBXIP1-201ENST00000368460 RNF181Q9P0P0 153 aa25.2■■□□□ 1.62
PBXIP1-201ENST00000368460 ARFGEF1Q9Y6D6 1849 aa25.2■■□□□ 1.62
PBXIP1-201ENST00000368460 ZPR1O75312 459 aa25.19■■□□□ 1.62
PBXIP1-201ENST00000368460 RBM46Q8TBY0 533 aaKnown RBP25.19■■□□□ 1.62
PBXIP1-201ENST00000368460 KCNA3P22001 575 aa25.18■■□□□ 1.62
PBXIP1-201ENST00000368460 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
PBXIP1-201ENST00000368460 DDR1Q08345 913 aa25.16■■□□□ 1.62
PBXIP1-201ENST00000368460 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
PBXIP1-201ENST00000368460 CHRNA5P30532 468 aa25.15■■□□□ 1.62
PBXIP1-201ENST00000368460 KNSTRNQ9Y448 316 aa25.15■■□□□ 1.62
PBXIP1-201ENST00000368460 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
PBXIP1-201ENST00000368460 KCPQ6ZWJ8 1503 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 TJP1Q07157 1748 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 FSTL1Q12841 308 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 AKAP4Q5JQC9 854 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 DNAJC10Q8IXB1 793 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 DNAJC5GQ8N7S2 189 aa25.13■■□□□ 1.61
PBXIP1-201ENST00000368460 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
PBXIP1-201ENST00000368460 USPL1Q5W0Q7 1092 aa25.12■■□□□ 1.61
PBXIP1-201ENST00000368460 INTS5Q6P9B9 1019 aaKnown RBP25.12■■□□□ 1.61
PBXIP1-201ENST00000368460 WDR90Q96KV7 1748 aa25.12■■□□□ 1.61
PBXIP1-201ENST00000368460 SCN11AQ9UI33 1791 aa25.11■■□□□ 1.61
PBXIP1-201ENST00000368460 RRAGCQ9HB90 399 aa25.11■■□□□ 1.61
PBXIP1-201ENST00000368460 SLC52A2Q9HAB3 445 aa25.1■■□□□ 1.61
PBXIP1-201ENST00000368460 IL13P35225 146 aa25.09■■□□□ 1.61
PBXIP1-201ENST00000368460 TM4SF1P30408 202 aa25.08■■□□□ 1.61
PBXIP1-201ENST00000368460 SOS1Q07889 1333 aaPredicted RBP25.08■■□□□ 1.6
PBXIP1-201ENST00000368460 HTRA3P83110 453 aa25.07■■□□□ 1.6
PBXIP1-201ENST00000368460 KLRG1Q96E93 195 aa25.07■■□□□ 1.6
PBXIP1-201ENST00000368460 SLC39A6Q13433 755 aa25.06■■□□□ 1.6
PBXIP1-201ENST00000368460 COL15A1P39059 1388 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 418.6 ms