RNA–Protein interactions for RNA: ENST00000366983.5

ATF3-204, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-204ENST00000366983 KIF13BQ9NQT8 1826 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 ERVV-2B6SEH9 535 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 GPR162Q16538 588 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
ATF3-204ENST00000366983 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
ATF3-204ENST00000366983 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
ATF3-204ENST00000366983 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
ATF3-204ENST00000366983 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
ATF3-204ENST00000366983 MORC1Q86VD1 984 aa11.24□□□□□ -0.61
ATF3-204ENST00000366983 NLGN2Q8NFZ4 835 aa11.24□□□□□ -0.61
ATF3-204ENST00000366983 TJP1Q07157 1748 aa11.23□□□□□ -0.61
ATF3-204ENST00000366983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.23□□□□□ -0.61
ATF3-204ENST00000366983 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
ATF3-204ENST00000366983 CNTNAP4Q9C0A0 1308 aa11.23□□□□□ -0.61
ATF3-204ENST00000366983 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
ATF3-204ENST00000366983 MSL1Q68DK7 614 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 ATG3Q9NT62 314 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
ATF3-204ENST00000366983 GNPATO15228 680 aa11.21□□□□□ -0.61
ATF3-204ENST00000366983 PHF14O94880 888 aa11.21□□□□□ -0.61
ATF3-204ENST00000366983 ITPK1Q13572 414 aa11.21□□□□□ -0.61
ATF3-204ENST00000366983 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.61
ATF3-204ENST00000366983 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
ATF3-204ENST00000366983 C10orf71Q711Q0 1435 aa11.2□□□□□ -0.62
ATF3-204ENST00000366983 ADCY9O60503 1353 aa11.2□□□□□ -0.62
ATF3-204ENST00000366983 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
ATF3-204ENST00000366983 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
ATF3-204ENST00000366983 VIRMAQ69YN4 1812 aaKnown RBP11.2□□□□□ -0.62
ATF3-204ENST00000366983 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
ATF3-204ENST00000366983 UBR2Q8IWV8 1755 aa11.19□□□□□ -0.62
ATF3-204ENST00000366983 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATF3-204ENST00000366983 IL13P35225 146 aa11.19□□□□□ -0.62
ATF3-204ENST00000366983 PELP1Q8IZL8 1130 aaKnown RBP11.19□□□□□ -0.62
ATF3-204ENST00000366983 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
ATF3-204ENST00000366983 CABP4P57796 275 aa11.18□□□□□ -0.62
ATF3-204ENST00000366983 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
ATF3-204ENST00000366983 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
ATF3-204ENST00000366983 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
ATF3-204ENST00000366983 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
ATF3-204ENST00000366983 MTHFSP49914 203 aa11.17□□□□□ -0.62
ATF3-204ENST00000366983 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
ATF3-204ENST00000366983 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
ATF3-204ENST00000366983 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
ATF3-204ENST00000366983 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
ATF3-204ENST00000366983 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
ATF3-204ENST00000366983 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
ATF3-204ENST00000366983 NLGN1Q8N2Q7 840 aa11.16□□□□□ -0.62
ATF3-204ENST00000366983 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
ATF3-204ENST00000366983 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
ATF3-204ENST00000366983 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
ATF3-204ENST00000366983 RPS6KA4O75676 772 aa11.15□□□□□ -0.62
ATF3-204ENST00000366983 MMP10P09238 476 aa11.15□□□□□ -0.62
ATF3-204ENST00000366983 C1QTNF8P60827 252 aa11.15□□□□□ -0.62
ATF3-204ENST00000366983 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
ATF3-204ENST00000366983 SIPA1L3O60292 1781 aaPredicted RBP11.14□□□□□ -0.63
ATF3-204ENST00000366983 TGFB2P61812 414 aa11.14□□□□□ -0.63
ATF3-204ENST00000366983 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
ATF3-204ENST00000366983 N4BP2Q86UW6 1770 aaPredicted RBP11.13□□□□□ -0.63
ATF3-204ENST00000366983 USP42Q9H9J4 1324 aaKnown RBP11.13□□□□□ -0.63
ATF3-204ENST00000366983 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
ATF3-204ENST00000366983 GYS1P13807 737 aa11.13□□□□□ -0.63
ATF3-204ENST00000366983 RFC4P35249 363 aa11.13□□□□□ -0.63
ATF3-204ENST00000366983 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
ATF3-204ENST00000366983 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
ATF3-204ENST00000366983 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
ATF3-204ENST00000366983 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
ATF3-204ENST00000366983 SCN7AQ01118 1682 aa11.13□□□□□ -0.63
ATF3-204ENST00000366983 NRXN2Q9P2S2 1712 aa11.12□□□□□ -0.63
ATF3-204ENST00000366983 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
ATF3-204ENST00000366983 DLEC1Q9Y238 1755 aa11.11□□□□□ -0.63
ATF3-204ENST00000366983 PTCD1O75127 700 aaKnown RBP11.11□□□□□ -0.63
ATF3-204ENST00000366983 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
ATF3-204ENST00000366983 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
ATF3-204ENST00000366983 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
ATF3-204ENST00000366983 COL15A1P39059 1388 aa11.1□□□□□ -0.63
ATF3-204ENST00000366983 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
ATF3-204ENST00000366983 SENP3-EIF4A1A0A087X0R7 540 aa11.09□□□□□ -0.63
ATF3-204ENST00000366983 HMOX1P09601 288 aa11.09□□□□□ -0.63
ATF3-204ENST00000366983 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
ATF3-204ENST00000366983 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
ATF3-204ENST00000366983 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
ATF3-204ENST00000366983 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
ATF3-204ENST00000366983 CEMIPQ8WUJ3 1361 aa11.08□□□□□ -0.64
ATF3-204ENST00000366983 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
ATF3-204ENST00000366983 INTS5Q6P9B9 1019 aaKnown RBP11.08□□□□□ -0.64
ATF3-204ENST00000366983 CYP19A1P11511 503 aaPredicted RBP11.07□□□□□ -0.64
ATF3-204ENST00000366983 CFAP53Q96M91 514 aa11.07□□□□□ -0.64
ATF3-204ENST00000366983 BCORQ6W2J9 1755 aa11.07□□□□□ -0.64
ATF3-204ENST00000366983 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
ATF3-204ENST00000366983 AFDNP55196 1824 aaKnown RBP11.07□□□□□ -0.64
ATF3-204ENST00000366983 TNRC6CQ9HCJ0 1690 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms