RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
PACRG-203ENST00000366889 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
PACRG-203ENST00000366889 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 APAF1O14727 1248 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
PACRG-203ENST00000366889 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 PLEKHF1Q96S99 279 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
PACRG-203ENST00000366889 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 STK25O00506 426 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 FCHSD2O94868 740 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 APBA3O96018 575 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
PACRG-203ENST00000366889 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
PACRG-203ENST00000366889 PRDM11Q9NQV5 511 aa11.3□□□□□ -0.6
PACRG-203ENST00000366889 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
PACRG-203ENST00000366889 HOXC9P31274 260 aa11.29□□□□□ -0.6
PACRG-203ENST00000366889 AMPHP49418 695 aa11.29□□□□□ -0.6
PACRG-203ENST00000366889 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
PACRG-203ENST00000366889 ARHGEF25Q86VW2 580 aa11.29□□□□□ -0.6
PACRG-203ENST00000366889 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
PACRG-203ENST00000366889 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
PACRG-203ENST00000366889 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
PACRG-203ENST00000366889 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
PACRG-203ENST00000366889 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
PACRG-203ENST00000366889 IP6K1Q92551 441 aa11.28□□□□□ -0.6
PACRG-203ENST00000366889 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
PACRG-203ENST00000366889 BTG4Q9NY30 223 aa11.28□□□□□ -0.6
PACRG-203ENST00000366889 LTN1O94822 1766 aa11.27□□□□□ -0.6
PACRG-203ENST00000366889 RGPD5Q99666 1765 aa11.27□□□□□ -0.6
PACRG-203ENST00000366889 GOLGB1Q14789 3259 aaKnown RBP11.27□□□□□ -0.61
PACRG-203ENST00000366889 TCP11L2Q8N4U5 519 aa11.27□□□□□ -0.61
PACRG-203ENST00000366889 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
PACRG-203ENST00000366889 COL18A1P39060 1754 aa11.27□□□□□ -0.61
PACRG-203ENST00000366889 CPDO75976 1380 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
PACRG-203ENST00000366889 SEC24BO95487 1268 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 CCDC27Q2M243 656 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
PACRG-203ENST00000366889 LMO7Q8WWI1 1683 aa11.26□□□□□ -0.61
PACRG-203ENST00000366889 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
PACRG-203ENST00000366889 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
PACRG-203ENST00000366889 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
PACRG-203ENST00000366889 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
PACRG-203ENST00000366889 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
PACRG-203ENST00000366889 NBPF14Q5TI25 921 aa11.25□□□□□ -0.61
PACRG-203ENST00000366889 RGPD3A6NKT7 1758 aaPredicted RBP11.24□□□□□ -0.61
PACRG-203ENST00000366889 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 KDRP35968 1356 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 ABCC6O95255 1503 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 HMOX1P09601 288 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 TMPOP42166 694 aaKnown RBP11.24□□□□□ -0.61
PACRG-203ENST00000366889 EYA1Q99502 592 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
PACRG-203ENST00000366889 ZBTB7AO95365 584 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 PLCG2P16885 1265 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 LHX8Q68G74 356 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 FAM196AQ6ZSG2 479 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
PACRG-203ENST00000366889 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
PACRG-203ENST00000366889 PTGER2P43116 358 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
PACRG-203ENST00000366889 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 PHACTR3Q96KR7 559 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
PACRG-203ENST00000366889 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
PACRG-203ENST00000366889 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
PACRG-203ENST00000366889 NCAPD2Q15021 1401 aa11.21□□□□□ -0.61
PACRG-203ENST00000366889 NEFMP07197 916 aa11.21□□□□□ -0.61
PACRG-203ENST00000366889 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
PACRG-203ENST00000366889 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
PACRG-203ENST00000366889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.61
PACRG-203ENST00000366889 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.62
PACRG-203ENST00000366889 EVA1CP58658 441 aa11.2□□□□□ -0.62
PACRG-203ENST00000366889 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
PACRG-203ENST00000366889 E9PSI1 815 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 RIPK4P57078 832 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 NEUROD2Q15784 382 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 DUSP27Q5VZP5 1158 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 PDCD7Q8N8D1 485 aaKnown RBP11.19□□□□□ -0.62
PACRG-203ENST00000366889 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 ANKRD24Q8TF21 1146 aa11.19□□□□□ -0.62
PACRG-203ENST00000366889 LTV1Q96GA3 475 aaPredicted RBP11.19□□□□□ -0.62
PACRG-203ENST00000366889 IL16Q14005 1332 aa11.18□□□□□ -0.62
PACRG-203ENST00000366889 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
PACRG-203ENST00000366889 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
PACRG-203ENST00000366889 ERBB3P21860 1342 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms