RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 SSFA2P28290 1259 aa11.12□□□□□ -0.63
PACRG-202ENST00000366888 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
PACRG-202ENST00000366888 VIRMAQ69YN4 1812 aaKnown RBP11.11□□□□□ -0.63
PACRG-202ENST00000366888 PXDNLA1KZ92 1463 aa11.11□□□□□ -0.63
PACRG-202ENST00000366888 MMP10P09238 476 aa11.11□□□□□ -0.63
PACRG-202ENST00000366888 PHKG2P15735 406 aa11.11□□□□□ -0.63
PACRG-202ENST00000366888 HSPA6P17066 643 aa11.11□□□□□ -0.63
PACRG-202ENST00000366888 CDCA8Q53HL2 280 aa11.11□□□□□ -0.63
PACRG-202ENST00000366888 ARFGEF1Q9Y6D6 1849 aa11.1□□□□□ -0.63
PACRG-202ENST00000366888 ZNF831Q5JPB2 1677 aa11.1□□□□□ -0.63
PACRG-202ENST00000366888 WASHC2AQ641Q2 1341 aa11.1□□□□□ -0.63
PACRG-202ENST00000366888 HMGB2P26583 209 aaKnown RBP11.1□□□□□ -0.63
PACRG-202ENST00000366888 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
PACRG-202ENST00000366888 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
PACRG-202ENST00000366888 KDRP35968 1356 aa11.09□□□□□ -0.63
PACRG-202ENST00000366888 KIF3CO14782 793 aa11.09□□□□□ -0.63
PACRG-202ENST00000366888 IFNL2Q8IZJ0 200 aa11.09□□□□□ -0.63
PACRG-202ENST00000366888 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
PACRG-202ENST00000366888 POLKQ9UBT6 870 aa11.09□□□□□ -0.63
PACRG-202ENST00000366888 TJP1Q07157 1748 aa11.08□□□□□ -0.64
PACRG-202ENST00000366888 EIF4A2Q14240 407 aaKnown RBP11.08□□□□□ -0.64
PACRG-202ENST00000366888 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
PACRG-202ENST00000366888 BCS1LQ9Y276 419 aa11.08□□□□□ -0.64
PACRG-202ENST00000366888 C10orf71Q711Q0 1435 aa11.08□□□□□ -0.64
PACRG-202ENST00000366888 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
PACRG-202ENST00000366888 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
PACRG-202ENST00000366888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
PACRG-202ENST00000366888 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
PACRG-202ENST00000366888 WDR90Q96KV7 1748 aa11.07□□□□□ -0.64
PACRG-202ENST00000366888 SBF1O95248 1867 aa11.07□□□□□ -0.64
PACRG-202ENST00000366888 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
PACRG-202ENST00000366888 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
PACRG-202ENST00000366888 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
PACRG-202ENST00000366888 ARHGEF1Q92888 912 aaKnown RBP11.05□□□□□ -0.64
PACRG-202ENST00000366888 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
PACRG-202ENST00000366888 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
PACRG-202ENST00000366888 GYS1P13807 737 aa11.04□□□□□ -0.64
PACRG-202ENST00000366888 DPEP1P16444 411 aa11.04□□□□□ -0.64
PACRG-202ENST00000366888 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
PACRG-202ENST00000366888 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
PACRG-202ENST00000366888 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
PACRG-202ENST00000366888 FCHSD2O94868 740 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
PACRG-202ENST00000366888 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
PACRG-202ENST00000366888 RFC4P35249 363 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 TGFB2P61812 414 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
PACRG-202ENST00000366888 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
PACRG-202ENST00000366888 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
PACRG-202ENST00000366888 CABP4P57796 275 aa11.02□□□□□ -0.65
PACRG-202ENST00000366888 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
PACRG-202ENST00000366888 PARP3Q9Y6F1 533 aa11.02□□□□□ -0.65
PACRG-202ENST00000366888 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
PACRG-202ENST00000366888 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 TOMM70O94826 608 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
PACRG-202ENST00000366888 KCNA3P22001 575 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 CRKLP46109 303 aaKnown RBP11.01□□□□□ -0.65
PACRG-202ENST00000366888 APLP1P51693 650 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 HTRA3P83110 453 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
PACRG-202ENST00000366888 C9orf131Q5VYM1 1079 aa11.01□□□□□ -0.65
PACRG-202ENST00000366888 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
PACRG-202ENST00000366888 CHRNA5P30532 468 aa11□□□□□ -0.65
PACRG-202ENST00000366888 MTHFSP49914 203 aa11□□□□□ -0.65
PACRG-202ENST00000366888 DDR1Q08345 913 aa11□□□□□ -0.65
PACRG-202ENST00000366888 FKBP8Q14318 412 aa11□□□□□ -0.65
PACRG-202ENST00000366888 PLEKHG2Q9H7P9 1386 aa11□□□□□ -0.65
PACRG-202ENST00000366888 TIAM2Q8IVF5 1701 aa10.99□□□□□ -0.65
PACRG-202ENST00000366888 DNAJC5GQ8N7S2 189 aa10.99□□□□□ -0.65
PACRG-202ENST00000366888 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
PACRG-202ENST00000366888 PANK3Q9H999 370 aa10.99□□□□□ -0.65
PACRG-202ENST00000366888 CACNA1SQ13698 1873 aa10.98□□□□□ -0.65
PACRG-202ENST00000366888 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
PACRG-202ENST00000366888 AMOTQ4VCS5 1084 aa10.98□□□□□ -0.65
PACRG-202ENST00000366888 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
PACRG-202ENST00000366888 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
PACRG-202ENST00000366888 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
PACRG-202ENST00000366888 SULT6B1Q6IMI4 303 aa10.97□□□□□ -0.65
PACRG-202ENST00000366888 RNF181Q9P0P0 153 aa10.97□□□□□ -0.65
PACRG-202ENST00000366888 PIM2Q9P1W9 311 aa10.97□□□□□ -0.65
PACRG-202ENST00000366888 DALRD3Q5D0E6 543 aaKnown RBP10.96□□□□□ -0.65
PACRG-202ENST00000366888 INTS5Q6P9B9 1019 aaKnown RBP10.96□□□□□ -0.65
PACRG-202ENST00000366888 MORC1Q86VD1 984 aa10.96□□□□□ -0.65
PACRG-202ENST00000366888 DNAJC10Q8IXB1 793 aa10.96□□□□□ -0.65
PACRG-202ENST00000366888 C16orf71Q8IYS4 520 aaPredicted RBP10.96□□□□□ -0.65
PACRG-202ENST00000366888 ANKRD31Q8N7Z5 1873 aa10.96□□□□□ -0.66
PACRG-202ENST00000366888 UBR2Q8IWV8 1755 aa10.96□□□□□ -0.66
PACRG-202ENST00000366888 HSPA5P11021 654 aaKnown RBP10.95□□□□□ -0.66
PACRG-202ENST00000366888 RASSF7Q02833 373 aa10.95□□□□□ -0.66
PACRG-202ENST00000366888 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
PACRG-202ENST00000366888 RRAGCQ9HB90 399 aa10.95□□□□□ -0.66
PACRG-202ENST00000366888 POLRMTO00411 1230 aaKnown RBP10.94□□□□□ -0.66
PACRG-202ENST00000366888 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
PACRG-202ENST00000366888 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms