RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
CAPN9-203ENST00000366666 THRAP3Q9Y2W1 955 aaKnown RBP15.81■□□□□ 0.12
CAPN9-203ENST00000366666 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
CAPN9-203ENST00000366666 PLIN1O60240 522 aa15.8■□□□□ 0.12
CAPN9-203ENST00000366666 TEFQ10587 303 aa15.8■□□□□ 0.12
CAPN9-203ENST00000366666 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
CAPN9-203ENST00000366666 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
CAPN9-203ENST00000366666 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
CAPN9-203ENST00000366666 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
CAPN9-203ENST00000366666 EXOC5O00471 708 aa15.79■□□□□ 0.12
CAPN9-203ENST00000366666 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
CAPN9-203ENST00000366666 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
CAPN9-203ENST00000366666 PPP4R2Q9NY27 417 aa15.78■□□□□ 0.12
CAPN9-203ENST00000366666 ITGB4P16144 1822 aa15.78■□□□□ 0.12
CAPN9-203ENST00000366666 ATRNO75882 1429 aa15.78■□□□□ 0.12
CAPN9-203ENST00000366666 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
CAPN9-203ENST00000366666 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
CAPN9-203ENST00000366666 RARSP54136 660 aaKnown RBP15.77■□□□□ 0.12
CAPN9-203ENST00000366666 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
CAPN9-203ENST00000366666 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
CAPN9-203ENST00000366666 DDB1Q16531 1140 aa15.77■□□□□ 0.12
CAPN9-203ENST00000366666 MRC1P22897 1456 aa15.77■□□□□ 0.12
CAPN9-203ENST00000366666 VAMP4O75379 141 aa15.77■□□□□ 0.11
CAPN9-203ENST00000366666 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.11
CAPN9-203ENST00000366666 THSD7AQ9UPZ6 1657 aa15.76■□□□□ 0.11
CAPN9-203ENST00000366666 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
CAPN9-203ENST00000366666 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
CAPN9-203ENST00000366666 QTRT2Q9H974 415 aaKnown RBP15.76■□□□□ 0.11
CAPN9-203ENST00000366666 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
CAPN9-203ENST00000366666 HSP90AB1P08238 724 aaKnown RBP15.75■□□□□ 0.11
CAPN9-203ENST00000366666 RRP1P56182 461 aaKnown RBP15.75■□□□□ 0.11
CAPN9-203ENST00000366666 EP400Q96L91 3159 aa15.75■□□□□ 0.11
CAPN9-203ENST00000366666 A0A0G2JS52 829 aa15.75■□□□□ 0.11
CAPN9-203ENST00000366666 SSH1Q8WYL5 1049 aa15.75■□□□□ 0.11
CAPN9-203ENST00000366666 CDCA7Q9BWT1 371 aaPredicted RBP15.75■□□□□ 0.11
CAPN9-203ENST00000366666 TRPC5Q9UL62 973 aaPredicted RBP15.75■□□□□ 0.11
CAPN9-203ENST00000366666 CABP4P57796 275 aa15.74■□□□□ 0.11
CAPN9-203ENST00000366666 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
CAPN9-203ENST00000366666 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
CAPN9-203ENST00000366666 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
CAPN9-203ENST00000366666 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
CAPN9-203ENST00000366666 BABAM1Q9NWV8 329 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 TNNQ9UQP3 1299 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 MSH5O43196 834 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 NECTIN2Q92692 538 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 C5P01031 1676 aa15.72■□□□□ 0.11
CAPN9-203ENST00000366666 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
CAPN9-203ENST00000366666 CT47B1P0C2W7 299 aaPredicted RBP15.71■□□□□ 0.11
CAPN9-203ENST00000366666 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.11
CAPN9-203ENST00000366666 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
CAPN9-203ENST00000366666 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
CAPN9-203ENST00000366666 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
CAPN9-203ENST00000366666 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
CAPN9-203ENST00000366666 PIGBQ92521 554 aa15.7■□□□□ 0.1
CAPN9-203ENST00000366666 UBR2Q8IWV8 1755 aa15.7■□□□□ 0.1
CAPN9-203ENST00000366666 RGS17Q9UGC6 210 aaPredicted RBP15.69■□□□□ 0.1
CAPN9-203ENST00000366666 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
CAPN9-203ENST00000366666 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
CAPN9-203ENST00000366666 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
CAPN9-203ENST00000366666 SEPT12Q8IYM1 358 aa15.69■□□□□ 0.1
CAPN9-203ENST00000366666 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
CAPN9-203ENST00000366666 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
CAPN9-203ENST00000366666 TMOD3Q9NYL9 352 aa15.68■□□□□ 0.1
CAPN9-203ENST00000366666 MRPL50Q8N5N7 158 aaKnown RBP15.68■□□□□ 0.1
CAPN9-203ENST00000366666 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
CAPN9-203ENST00000366666 KCNQ2O43526 872 aa15.67■□□□□ 0.1
CAPN9-203ENST00000366666 GIGYF1O75420 1035 aaPredicted RBP15.67■□□□□ 0.1
CAPN9-203ENST00000366666 PTF1AQ7RTS3 328 aa15.67■□□□□ 0.1
CAPN9-203ENST00000366666 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
CAPN9-203ENST00000366666 KCPQ6ZWJ8 1503 aa15.67■□□□□ 0.1
CAPN9-203ENST00000366666 BCL9O00512 1426 aa15.67■□□□□ 0.1
CAPN9-203ENST00000366666 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
CAPN9-203ENST00000366666 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
CAPN9-203ENST00000366666 PTCD1O75127 700 aaKnown RBP15.65■□□□□ 0.1
CAPN9-203ENST00000366666 RLBP1P12271 317 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 ZNF772Q68DY9 489 aaPredicted RBP15.65■□□□□ 0.1
CAPN9-203ENST00000366666 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 CLUAP1Q96AJ1 413 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 G2E3Q7L622 706 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
CAPN9-203ENST00000366666 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
CAPN9-203ENST00000366666 HDGFL1Q5TGJ6 251 aa15.64■□□□□ 0.09
CAPN9-203ENST00000366666 ANXA1P04083 346 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 EXOC6Q8TAG9 804 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 TRIM27P14373 513 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 CANXP27824 592 aaKnown RBP15.63■□□□□ 0.09
CAPN9-203ENST00000366666 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 CRBNQ96SW2 442 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
CAPN9-203ENST00000366666 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
CAPN9-203ENST00000366666 CHPF2Q9P2E5 772 aa15.62■□□□□ 0.09
CAPN9-203ENST00000366666 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
CAPN9-203ENST00000366666 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
CAPN9-203ENST00000366666 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
CAPN9-203ENST00000366666 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms