RNA–Protein interactions for RNA: ENST00000366517.5

SMYD3-202, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-202ENST00000366517 CPDO75976 1380 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 RAB3GAP2Q9H2M9 1393 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 APLP1P51693 650 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 TXNRD1Q16881 649 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
SMYD3-202ENST00000366517 CHRNA2Q15822 529 aa10.85□□□□□ -0.67
SMYD3-202ENST00000366517 CFAP70Q5T0N1 1121 aa10.85□□□□□ -0.67
SMYD3-202ENST00000366517 LARP1Q6PKG0 1096 aaKnown RBP10.85□□□□□ -0.67
SMYD3-202ENST00000366517 GPBP1L1Q9HC44 474 aaPredicted RBP10.85□□□□□ -0.67
SMYD3-202ENST00000366517 PHRF1Q9P1Y6 1649 aaKnown RBP10.85□□□□□ -0.67
SMYD3-202ENST00000366517 LMO7Q8WWI1 1683 aa10.84□□□□□ -0.67
SMYD3-202ENST00000366517 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
SMYD3-202ENST00000366517 PRAM1Q96QH2 718 aa10.84□□□□□ -0.67
SMYD3-202ENST00000366517 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
SMYD3-202ENST00000366517 ATP10DQ9P241 1426 aa10.84□□□□□ -0.67
SMYD3-202ENST00000366517 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
SMYD3-202ENST00000366517 POGKQ9P215 609 aa10.83□□□□□ -0.68
SMYD3-202ENST00000366517 ADCY9O60503 1353 aa10.83□□□□□ -0.68
SMYD3-202ENST00000366517 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
SMYD3-202ENST00000366517 CDCA7Q9BWT1 371 aaPredicted RBP10.82□□□□□ -0.68
SMYD3-202ENST00000366517 CRB1P82279 1406 aa10.82□□□□□ -0.68
SMYD3-202ENST00000366517 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
SMYD3-202ENST00000366517 ZC3H6P61129 1189 aaKnown RBP10.81□□□□□ -0.68
SMYD3-202ENST00000366517 DDB1Q16531 1140 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 PCNTO95613 3336 aa10.81□□□□□ -0.68
SMYD3-202ENST00000366517 COL13A1Q5TAT6 717 aaPredicted RBP10.8□□□□□ -0.68
SMYD3-202ENST00000366517 PTF1AQ7RTS3 328 aa10.8□□□□□ -0.68
SMYD3-202ENST00000366517 NGDNQ8NEJ9 315 aaKnown RBP10.8□□□□□ -0.68
SMYD3-202ENST00000366517 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
SMYD3-202ENST00000366517 ADGRB1O14514 1584 aa10.8□□□□□ -0.68
SMYD3-202ENST00000366517 PAPPAQ13219 1627 aa10.8□□□□□ -0.68
SMYD3-202ENST00000366517 COL5A2P05997 1499 aaPredicted RBP10.8□□□□□ -0.68
SMYD3-202ENST00000366517 POLD1P28340 1107 aa10.79□□□□□ -0.68
SMYD3-202ENST00000366517 JMYQ8N9B5 988 aa10.79□□□□□ -0.68
SMYD3-202ENST00000366517 AKAP12Q02952 1782 aa10.79□□□□□ -0.68
SMYD3-202ENST00000366517 DCAF11Q8TEB1 546 aa10.78□□□□□ -0.68
SMYD3-202ENST00000366517 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
SMYD3-202ENST00000366517 PRR36Q9H6K5 1346 aa10.78□□□□□ -0.68
SMYD3-202ENST00000366517 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.68
SMYD3-202ENST00000366517 YBX3P16989 372 aaKnown RBP eCLIP10.77□□□□□ -0.682e-7■■□□□ 13.1
SMYD3-202ENST00000366517 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.68
SMYD3-202ENST00000366517 TNS4Q8IZW8 715 aa10.77□□□□□ -0.68
SMYD3-202ENST00000366517 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.68
SMYD3-202ENST00000366517 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.68
SMYD3-202ENST00000366517 ITSN1Q15811 1721 aa10.77□□□□□ -0.69
SMYD3-202ENST00000366517 PDIA6Q15084 440 aa10.77□□□□□ -0.69
SMYD3-202ENST00000366517 TRAK1Q9UPV9 953 aa10.77□□□□□ -0.69
SMYD3-202ENST00000366517 TOPAZ1Q8N9V7 1692 aa10.76□□□□□ -0.69
SMYD3-202ENST00000366517 USP19O94966 1318 aa10.76□□□□□ -0.69
SMYD3-202ENST00000366517 BRD4O60885 1362 aaPredicted RBP10.76□□□□□ -0.69
SMYD3-202ENST00000366517 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.695e-6■■■□□ 15.2
SMYD3-202ENST00000366517 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
SMYD3-202ENST00000366517 WNK3Q9BYP7 1800 aa10.75□□□□□ -0.69
SMYD3-202ENST00000366517 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
SMYD3-202ENST00000366517 TOMM70O94826 608 aa10.74□□□□□ -0.69
SMYD3-202ENST00000366517 DDX12PQ92771 950 aa10.74□□□□□ -0.69
SMYD3-202ENST00000366517 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
SMYD3-202ENST00000366517 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
SMYD3-202ENST00000366517 GCP02774 474 aa10.73□□□□□ -0.69
SMYD3-202ENST00000366517 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
SMYD3-202ENST00000366517 KLRG1Q96E93 195 aa10.73□□□□□ -0.69
SMYD3-202ENST00000366517 NLRP13Q86W25 1043 aa10.72□□□□□ -0.69
SMYD3-202ENST00000366517 ZNF687Q8N1G0 1237 aa10.72□□□□□ -0.69
SMYD3-202ENST00000366517 ARHGEF28Q8N1W1 1705 aaKnown RBP10.72□□□□□ -0.69
SMYD3-202ENST00000366517 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
SMYD3-202ENST00000366517 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 GRXCR2A6NFK2 248 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 FOSBP53539 338 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 ZNF827Q17R98 1081 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 SLC27A3Q5K4L6 730 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 POTEBQ6S5H4 581 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 ABTB2Q8N961 1025 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
SMYD3-202ENST00000366517 CD2APQ9Y5K6 639 aa10.71□□□□□ -0.69
SMYD3-202ENST00000366517 WDR90Q96KV7 1748 aa10.71□□□□□ -0.7
SMYD3-202ENST00000366517 PLEKHG3A1L390 1219 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 EXOC5O00471 708 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 PHF14O94880 888 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 TOM1L2Q6ZVM7 507 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 WDR17Q8IZU2 1322 aa10.7□□□□□ -0.7
SMYD3-202ENST00000366517 EPAS1Q99814 870 aa10.69□□□□□ -0.7
SMYD3-202ENST00000366517 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
SMYD3-202ENST00000366517 COL18A1P39060 1754 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 NUTM2GQ5VZR2 741 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 CDK19Q9BWU1 502 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
SMYD3-202ENST00000366517 PBX2P40425 430 aa10.67□□□□□ -0.7
SMYD3-202ENST00000366517 ZNF526Q8TF50 670 aaPredicted RBP10.67□□□□□ -0.7
SMYD3-202ENST00000366517 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
SMYD3-202ENST00000366517 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
SMYD3-202ENST00000366517 BTAF1O14981 1849 aa10.67□□□□□ -0.7
SMYD3-202ENST00000366517 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms