RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 CENPCQ03188 943 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 CLN3Q13286 438 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 TRIM47Q96LD4 638 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 ZSCAN10Q96SZ4 725 aaPredicted RBP6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 HINFPQ9BQA5 517 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 ESYT1Q9BSJ8 1104 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 KIAA1024Q9UPX6 916 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 ACIN1Q9UKV3 1341 aaKnown RBP6.65□□□□□ -1.35
RNU4-1-201ENST00000363925 SFI1A8K8P3 1242 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 INHAP05111 366 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 DPYDQ12882 1025 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 CRTC2Q53ET0 693 aaPredicted RBP6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 LYSMD3Q7Z3D4 306 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 LARGE2Q8N3Y3 721 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 ZNF358Q9NW07 568 aa6.64□□□□□ -1.35
RNU4-1-201ENST00000363925 TMEM229AB2RXF0 380 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 PHKA2P46019 1235 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 SCNN1DP51172 638 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 GNASQ5JWF2 1037 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 ANKMY2Q8IV38 441 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 RNF217Q8TC41 542 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 XAGE2Q96GT9 111 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 DNMT3LQ9UJW3 386 aa6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 NOVA2Q9UNW9 492 aaKnown RBP6.63□□□□□ -1.35
RNU4-1-201ENST00000363925 FAM196BA6NMK8 535 aa6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 RNF144AP50876 292 aaPredicted RBP6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 SEC13P55735 322 aa6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 POU4F2Q12837 409 aa6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 TNS4Q8IZW8 715 aa6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 CABP1Q9NZU7 370 aa6.62□□□□□ -1.35
RNU4-1-201ENST00000363925 SMTNP53814 917 aa6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 PTK7Q13308 1070 aa6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 AIDAQ96BJ3 306 aa6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 GAS2L1Q99501 681 aaPredicted RBP6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 CHMP3Q9Y3E7 222 aa6.61□□□□□ -1.35
RNU4-1-201ENST00000363925 A6NJY4 79 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 CSB-PGBD3P0DP91 1061 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 GPC1P35052 558 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 PLA2G4AP47712 749 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 TAS1R3Q7RTX0 852 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 SIX5Q8N196 739 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 CHMP7Q8WUX9 453 aaPredicted RBP6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 ZNF232Q9UNY5 417 aa6.6□□□□□ -1.35
RNU4-1-201ENST00000363925 NBPF15Q8N660 670 aa6.59□□□□□ -1.35
RNU4-1-201ENST00000363925 TIMMDC1Q9NPL8 285 aa6.59□□□□□ -1.35
RNU4-1-201ENST00000363925 WASLO00401 505 aaPredicted RBP6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 PPP1R15AO75807 674 aaPredicted RBP6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 VEGFBP49765 207 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 RIPOR1Q6ZS17 1223 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 SLC9A9Q8IVB4 645 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 RHBDD1Q8TEB9 315 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 GRIP2Q9C0E4 1043 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
RNU4-1-201ENST00000363925 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 ATG7O95352 703 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 PTSQ03393 145 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 STK32AQ8WU08 396 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 SCG3Q8WXD2 468 aaKnown RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 VTI1AQ96AJ9 217 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 NIFKQ9BYG3 293 aaKnown RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 FHDC1Q9C0D6 1143 aaPredicted RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 TSPAN10Q9H1Z9 355 aaPredicted RBP6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
RNU4-1-201ENST00000363925 CDC14CA4D256 554 aa6.56□□□□□ -1.36
RNU4-1-201ENST00000363925 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
RNU4-1-201ENST00000363925 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
RNU4-1-201ENST00000363925 CDK2AP1O14519 115 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 PRMT3O60678 531 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 TMEM164Q5U3C3 297 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 CCDC155Q8N6L0 562 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 NGLY1Q96IV0 654 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 PRIMPOLQ96LW4 560 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 SLC4A9Q96Q91 983 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 SCHIP1Q9P0W5 487 aaPredicted RBP6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 ZMIZ1Q9ULJ6 1067 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 HRH3Q9Y5N1 445 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 ATAD2Q6PL18 1390 aa6.55□□□□□ -1.36
RNU4-1-201ENST00000363925 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 M0R2N6 131 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 TATP17735 454 aaPredicted RBP6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 NBPF1Q3BBV0 1214 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 BICDL1Q6ZP65 573 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 PGBD3Q8N328 593 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 ARXQ96QS3 562 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 HCN4Q9Y3Q4 1203 aa6.54□□□□□ -1.36
RNU4-1-201ENST00000363925 GJA3Q9Y6H8 435 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms