RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 PTK7Q13308 1070 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 TLR1Q15399 786 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 CDCA8Q53HL2 280 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 GNASQ5JWF2 1037 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 TRIM46Q7Z4K8 759 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZSCAN10Q96SZ4 725 aaPredicted RBP5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 INSM2Q96T92 566 aaPredicted RBP5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 RAB6BQ9NRW1 208 aa5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 NOVA2Q9UNW9 492 aaKnown RBP5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZBTB7BO15156 539 aaPredicted RBP5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 MAN1A2O60476 641 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 SMTNP53814 917 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 CRTC2Q53ET0 693 aaPredicted RBP5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 TMEM214Q6NUQ4 689 aaKnown RBP5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 LYSMD3Q7Z3D4 306 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 TRIM47Q96LD4 638 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 SLC4A9Q96Q91 983 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZNF358Q9NW07 568 aa5.1□□□□□ -1.59
RNU6-428P-201ENST00000362942 SOS2Q07890 1332 aaPredicted RBP5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 A6NJY4 79 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 TMEM229AB2RXF0 380 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 C11orf95C9JLR9 678 aaPredicted RBP5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 IL2RAP01589 272 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 SCNN1DP51172 638 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 SRPK2P78362 688 aaKnown RBP5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 CENPCQ03188 943 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 DPYDQ12882 1025 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 SWI5Q1ZZU3 235 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 KDF1Q8NAX2 398 aaPredicted RBP5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 GAS2L2Q8NHY3 880 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 SERTAD1Q9UHV2 236 aa5.09□□□□□ -1.59
RNU6-428P-201ENST00000362942 CDK2AP1O14519 115 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 CTSOP43234 321 aaPredicted RBP5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 MTFR1Q15390 333 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 WDR44Q5JSH3 913 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 TAS1R3Q7RTX0 852 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 RNF217Q8TC41 542 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 RHBDD1Q8TEB9 315 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 HINFPQ9BQA5 517 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 GRIP2Q9C0E4 1043 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 GMPR2Q9P2T1 348 aaKnown RBP5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 KIAA1024Q9UPX6 916 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 USTQ9Y2C2 406 aa5.08□□□□□ -1.6
RNU6-428P-201ENST00000362942 SFI1A8K8P3 1242 aa5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 SPATA31C2B4DYI2 1134 aa5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 FOXD4L5Q5VV16 416 aaPredicted RBP5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 B4GALNT3Q6L9W6 998 aa5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 PPARGC1BQ86YN6 1023 aaKnown RBP5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 NIFKQ9BYG3 293 aaKnown RBP5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 DACH1Q9UI36 760 aa5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 HRH3Q9Y5N1 445 aa5.07□□□□□ -1.6
RNU6-428P-201ENST00000362942 FIGNL2A6NMB9 653 aa5.06□□□□□ -1.6
RNU6-428P-201ENST00000362942 ARXQ96QS3 562 aa5.06□□□□□ -1.6
RNU6-428P-201ENST00000362942 FHDC1Q9C0D6 1143 aaPredicted RBP5.06□□□□□ -1.6
RNU6-428P-201ENST00000362942 CABP1Q9NZU7 370 aa5.06□□□□□ -1.6
RNU6-428P-201ENST00000362942 SCHIP1Q9P0W5 487 aaPredicted RBP5.06□□□□□ -1.6
RNU6-428P-201ENST00000362942 DKK1O94907 266 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 PSMA6P60900 246 aaKnown RBP5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 NBPF1Q3BBV0 1214 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 ZNF787Q6DD87 383 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 PRICKLE2Q7Z3G6 844 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 TNS4Q8IZW8 715 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 TSEN2Q8NCE0 465 aaKnown RBP5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 VTI1AQ96AJ9 217 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 DNMT3LQ9UJW3 386 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 ZMIZ1Q9ULJ6 1067 aa5.05□□□□□ -1.6
RNU6-428P-201ENST00000362942 A0A1B0GTH6 734 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 FOXO3O43524 673 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 STAU1O95793 577 aaKnown RBP5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 IGFBP4P22692 258 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 POU4F2Q12837 409 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 TMEM164Q5U3C3 297 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 NBPF10Q6P3W6 841 aaKnown RBP5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 SLC9A9Q8IVB4 645 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 STAG2Q8N3U4 1231 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 C1orf216Q8TAB5 229 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 CLP1Q92989 425 aaKnown RBP5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 TIMMDC1Q9NPL8 285 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 ATAD2Q6PL18 1390 aa5.04□□□□□ -1.6
RNU6-428P-201ENST00000362942 SERTM1A2A2V5 107 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 H7C1W4 665 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 PPP1R12BO60237 982 aaPredicted RBP5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 TATP17735 454 aaPredicted RBP5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 EPHA4P54764 986 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 FOXK2Q01167 660 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 TEAD4Q15561 434 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 STK32AQ8WU08 396 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 SCG3Q8WXD2 468 aaKnown RBP5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 GMCL1Q96IK5 515 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 TSPAN10Q9H1Z9 355 aaPredicted RBP5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 ZNF232Q9UNY5 417 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 MTMR7Q9Y216 660 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 DYRK1BQ9Y463 629 aa5.03□□□□□ -1.6
RNU6-428P-201ENST00000362942 LCE2BO14633 110 aa5.02□□□□□ -1.61
RNU6-428P-201ENST00000362942 PTCD1O75127 700 aaKnown RBP5.02□□□□□ -1.61
RNU6-428P-201ENST00000362942 SNRPBP14678 240 aaKnown RBP5.02□□□□□ -1.61
RNU6-428P-201ENST00000362942 NOS2P35228 1153 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms