RNA–Protein interactions for RNA: ENST00000361731.3

SFT2D1-201, Transcript of SFT2 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFT2D1, Length 1,079 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-201ENST00000361731 EMILIN1Q9Y6C2 1016 aa22.41■■□□□ 1.18
SFT2D1-201ENST00000361731 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
SFT2D1-201ENST00000361731 MMP10P09238 476 aa22.39■■□□□ 1.17
SFT2D1-201ENST00000361731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.39■■□□□ 1.17
SFT2D1-201ENST00000361731 COL5A3P25940 1745 aaPredicted RBP22.39■■□□□ 1.17
SFT2D1-201ENST00000361731 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
SFT2D1-201ENST00000361731 TOMM70O94826 608 aa22.38■■□□□ 1.17
SFT2D1-201ENST00000361731 CARD14Q9BXL6 1004 aa22.38■■□□□ 1.17
SFT2D1-201ENST00000361731 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
SFT2D1-201ENST00000361731 GNPATO15228 680 aa22.37■■□□□ 1.17
SFT2D1-201ENST00000361731 TGFB2P61812 414 aa22.37■■□□□ 1.17
SFT2D1-201ENST00000361731 SLC4A9Q96Q91 983 aa22.37■■□□□ 1.17
SFT2D1-201ENST00000361731 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
SFT2D1-201ENST00000361731 PLEKHG2Q9H7P9 1386 aa22.36■■□□□ 1.17
SFT2D1-201ENST00000361731 PHKG2P15735 406 aa22.35■■□□□ 1.17
SFT2D1-201ENST00000361731 SPG7Q9UQ90 795 aa22.35■■□□□ 1.17
SFT2D1-201ENST00000361731 ARFGEF1Q9Y6D6 1849 aa22.35■■□□□ 1.17
SFT2D1-201ENST00000361731 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
SFT2D1-201ENST00000361731 EYA1Q99502 592 aa22.34■■□□□ 1.17
SFT2D1-201ENST00000361731 NMRK2Q9NPI5 230 aa22.34■■□□□ 1.17
SFT2D1-201ENST00000361731 TMOD3Q9NYL9 352 aa22.34■■□□□ 1.17
SFT2D1-201ENST00000361731 KCNA3P22001 575 aa22.33■■□□□ 1.17
SFT2D1-201ENST00000361731 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
SFT2D1-201ENST00000361731 A0A0G2JLW4 131 aa22.32■■□□□ 1.16
SFT2D1-201ENST00000361731 TMF1P82094 1093 aa22.32■■□□□ 1.16
SFT2D1-201ENST00000361731 PCNTO95613 3336 aa22.32■■□□□ 1.16
SFT2D1-201ENST00000361731 MYH14Q7Z406 1995 aaKnown RBP22.31■■□□□ 1.16
SFT2D1-201ENST00000361731 GYS1P13807 737 aa22.3■■□□□ 1.16
SFT2D1-201ENST00000361731 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
SFT2D1-201ENST00000361731 JMYQ8N9B5 988 aa22.3■■□□□ 1.16
SFT2D1-201ENST00000361731 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
SFT2D1-201ENST00000361731 DPEP1P16444 411 aa22.29■■□□□ 1.16
SFT2D1-201ENST00000361731 RC3H1Q5TC82 1133 aaKnown RBP22.29■■□□□ 1.16
SFT2D1-201ENST00000361731 IFNL2Q8IZJ0 200 aa22.29■■□□□ 1.16
SFT2D1-201ENST00000361731 RBM46Q8TBY0 533 aaKnown RBP22.29■■□□□ 1.16
SFT2D1-201ENST00000361731 CNTNAP4Q9C0A0 1308 aa22.29■■□□□ 1.16
SFT2D1-201ENST00000361731 ARHGEF1Q92888 912 aaKnown RBP22.28■■□□□ 1.16
SFT2D1-201ENST00000361731 ADAMTS7Q9UKP4 1686 aa22.27■■□□□ 1.16
SFT2D1-201ENST00000361731 TRAPPC3LQ5T215 181 aa22.27■■□□□ 1.16
SFT2D1-201ENST00000361731 RTCBQ9Y3I0 505 aaKnown RBP22.27■■□□□ 1.16
SFT2D1-201ENST00000361731 POLKQ9UBT6 870 aa22.26■■□□□ 1.15
SFT2D1-201ENST00000361731 KDM6AO15550 1401 aaPredicted RBP22.25■■□□□ 1.15
SFT2D1-201ENST00000361731 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
SFT2D1-201ENST00000361731 KLRG1Q96E93 195 aa22.25■■□□□ 1.15
SFT2D1-201ENST00000361731 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
SFT2D1-201ENST00000361731 DCAF5Q96JK2 942 aa22.24■■□□□ 1.15
SFT2D1-201ENST00000361731 CCDC87Q9NVE4 849 aa22.24■■□□□ 1.15
SFT2D1-201ENST00000361731 KCPQ6ZWJ8 1503 aa22.23■■□□□ 1.15
SFT2D1-201ENST00000361731 ERVV-2B6SEH9 535 aa22.23■■□□□ 1.15
SFT2D1-201ENST00000361731 HTRA3P83110 453 aa22.23■■□□□ 1.15
SFT2D1-201ENST00000361731 C9orf131Q5VYM1 1079 aa22.23■■□□□ 1.15
SFT2D1-201ENST00000361731 SBF1O95248 1867 aa22.23■■□□□ 1.15
SFT2D1-201ENST00000361731 FCHSD2O94868 740 aa22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 FSTL1Q12841 308 aa22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 EIF4A2Q14240 407 aaKnown RBP22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 COL13A1Q5TAT6 717 aaPredicted RBP22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 TNRC6CQ9HCJ0 1690 aaKnown RBP22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 TJP1Q07157 1748 aa22.22■■□□□ 1.15
SFT2D1-201ENST00000361731 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
SFT2D1-201ENST00000361731 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
SFT2D1-201ENST00000361731 DDR1Q08345 913 aa22.19■■□□□ 1.14
SFT2D1-201ENST00000361731 PARP3Q9Y6F1 533 aa22.18■■□□□ 1.14
SFT2D1-201ENST00000361731 USP42Q9H9J4 1324 aaKnown RBP22.17■■□□□ 1.14
SFT2D1-201ENST00000361731 RFC4P35249 363 aa22.17■■□□□ 1.14
SFT2D1-201ENST00000361731 PIM2Q9P1W9 311 aa22.17■■□□□ 1.14
SFT2D1-201ENST00000361731 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
SFT2D1-201ENST00000361731 FKBP8Q14318 412 aa22.15■■□□□ 1.14
SFT2D1-201ENST00000361731 SRP68Q9UHB9 627 aaKnown RBP22.15■■□□□ 1.14
SFT2D1-201ENST00000361731 NRXN2Q9P2S2 1712 aa22.14■■□□□ 1.14
SFT2D1-201ENST00000361731 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
SFT2D1-201ENST00000361731 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
SFT2D1-201ENST00000361731 TM4SF1P30408 202 aa22.13■■□□□ 1.13
SFT2D1-201ENST00000361731 CRKLP46109 303 aaKnown RBP22.13■■□□□ 1.13
SFT2D1-201ENST00000361731 DALRD3Q5D0E6 543 aaKnown RBP22.13■■□□□ 1.13
SFT2D1-201ENST00000361731 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
SFT2D1-201ENST00000361731 POLRMTO00411 1230 aaKnown RBP22.12■■□□□ 1.13
SFT2D1-201ENST00000361731 RNF181Q9P0P0 153 aa22.12■■□□□ 1.13
SFT2D1-201ENST00000361731 CHRNA5P30532 468 aa22.11■■□□□ 1.13
SFT2D1-201ENST00000361731 PRELPP51888 382 aa22.11■■□□□ 1.13
SFT2D1-201ENST00000361731 RRAGCQ9HB90 399 aa22.11■■□□□ 1.13
SFT2D1-201ENST00000361731 ZC3H4Q9UPT8 1303 aaKnown RBP22.1■■□□□ 1.13
SFT2D1-201ENST00000361731 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
SFT2D1-201ENST00000361731 RNF39Q9H2S5 420 aa22.1■■□□□ 1.13
SFT2D1-201ENST00000361731 AFDNP55196 1824 aaKnown RBP22.09■■□□□ 1.13
SFT2D1-201ENST00000361731 C16orf71Q8IYS4 520 aaPredicted RBP22.09■■□□□ 1.13
SFT2D1-201ENST00000361731 SCN11AQ9UI33 1791 aa22.09■■□□□ 1.13
SFT2D1-201ENST00000361731 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
SFT2D1-201ENST00000361731 ZNF530Q6P9A1 599 aaPredicted RBP22.08■■□□□ 1.13
SFT2D1-201ENST00000361731 PTCD1O75127 700 aaKnown RBP22.07■■□□□ 1.12
SFT2D1-201ENST00000361731 CABP4P57796 275 aa22.07■■□□□ 1.12
SFT2D1-201ENST00000361731 AMOTQ4VCS5 1084 aa22.07■■□□□ 1.12
SFT2D1-201ENST00000361731 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
SFT2D1-201ENST00000361731 MRC1P22897 1456 aa22.05■■□□□ 1.12
SFT2D1-201ENST00000361731 RASSF7Q02833 373 aa22.05■■□□□ 1.12
SFT2D1-201ENST00000361731 AEBP1Q8IUX7 1158 aa22.05■■□□□ 1.12
SFT2D1-201ENST00000361731 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
SFT2D1-201ENST00000361731 SOS1Q07889 1333 aaPredicted RBP22.05■■□□□ 1.12
SFT2D1-201ENST00000361731 NFATC2IPQ8NCF5 419 aa22.04■■□□□ 1.12
SFT2D1-201ENST00000361731 MTHFSP49914 203 aa22.03■■□□□ 1.12
SFT2D1-201ENST00000361731 TNS4Q8IZW8 715 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms