RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
CCDC197-201ENST00000359253 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
CCDC197-201ENST00000359253 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
CCDC197-201ENST00000359253 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 IL2RBP14784 551 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 CCDC125Q86Z20 511 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
CCDC197-201ENST00000359253 A0A0G2JS52 829 aa17.27■□□□□ 0.36
CCDC197-201ENST00000359253 MYT1Q01538 1121 aa17.27■□□□□ 0.36
CCDC197-201ENST00000359253 DDB1Q16531 1140 aa17.27■□□□□ 0.36
CCDC197-201ENST00000359253 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
CCDC197-201ENST00000359253 TSPYL4Q9UJ04 414 aa17.27■□□□□ 0.36
CCDC197-201ENST00000359253 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.35
CCDC197-201ENST00000359253 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
CCDC197-201ENST00000359253 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
CCDC197-201ENST00000359253 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
CCDC197-201ENST00000359253 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
CCDC197-201ENST00000359253 ATF7IPQ6VMQ6 1270 aa17.25■□□□□ 0.35
CCDC197-201ENST00000359253 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
CCDC197-201ENST00000359253 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
CCDC197-201ENST00000359253 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
CCDC197-201ENST00000359253 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
CCDC197-201ENST00000359253 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
CCDC197-201ENST00000359253 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
CCDC197-201ENST00000359253 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
CCDC197-201ENST00000359253 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
CCDC197-201ENST00000359253 TEFQ10587 303 aa17.22■□□□□ 0.35
CCDC197-201ENST00000359253 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
CCDC197-201ENST00000359253 NOB1Q9ULX3 412 aaKnown RBP17.22■□□□□ 0.35
CCDC197-201ENST00000359253 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
CCDC197-201ENST00000359253 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.35
CCDC197-201ENST00000359253 HOXB7P09629 217 aa17.21■□□□□ 0.35
CCDC197-201ENST00000359253 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
CCDC197-201ENST00000359253 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
CCDC197-201ENST00000359253 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
CCDC197-201ENST00000359253 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
CCDC197-201ENST00000359253 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
CCDC197-201ENST00000359253 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCDC197-201ENST00000359253 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
CCDC197-201ENST00000359253 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
CCDC197-201ENST00000359253 TRIM27P14373 513 aa17.19■□□□□ 0.34
CCDC197-201ENST00000359253 BCL9O00512 1426 aa17.19■□□□□ 0.34
CCDC197-201ENST00000359253 PTPRCP08575 1304 aa17.19■□□□□ 0.34
CCDC197-201ENST00000359253 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
CCDC197-201ENST00000359253 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
CCDC197-201ENST00000359253 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
CCDC197-201ENST00000359253 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
CCDC197-201ENST00000359253 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
CCDC197-201ENST00000359253 PHKG2P15735 406 aa17.17■□□□□ 0.34
CCDC197-201ENST00000359253 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
CCDC197-201ENST00000359253 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
CCDC197-201ENST00000359253 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
CCDC197-201ENST00000359253 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
CCDC197-201ENST00000359253 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
CCDC197-201ENST00000359253 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
CCDC197-201ENST00000359253 MEGF6O75095 1541 aa17.16■□□□□ 0.34
CCDC197-201ENST00000359253 BRWD3Q6RI45 1802 aa17.15■□□□□ 0.34
CCDC197-201ENST00000359253 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
CCDC197-201ENST00000359253 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
CCDC197-201ENST00000359253 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
CCDC197-201ENST00000359253 RLBP1P12271 317 aa17.14■□□□□ 0.33
CCDC197-201ENST00000359253 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
CCDC197-201ENST00000359253 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
CCDC197-201ENST00000359253 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
CCDC197-201ENST00000359253 TNS2Q63HR2 1409 aa17.13■□□□□ 0.33
CCDC197-201ENST00000359253 EIF4A1P60842 406 aaKnown RBP17.13■□□□□ 0.33
CCDC197-201ENST00000359253 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
CCDC197-201ENST00000359253 KDM3BQ7LBC6 1761 aa17.12■□□□□ 0.33
CCDC197-201ENST00000359253 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
CCDC197-201ENST00000359253 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
CCDC197-201ENST00000359253 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
CCDC197-201ENST00000359253 ABCC4O15439 1325 aa17.12■□□□□ 0.33
CCDC197-201ENST00000359253 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
CCDC197-201ENST00000359253 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
CCDC197-201ENST00000359253 SCN11AQ9UI33 1791 aa17.11■□□□□ 0.33
CCDC197-201ENST00000359253 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
CCDC197-201ENST00000359253 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
CCDC197-201ENST00000359253 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
CCDC197-201ENST00000359253 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
CCDC197-201ENST00000359253 KRT24Q2M2I5 525 aa17.1■□□□□ 0.33
CCDC197-201ENST00000359253 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
CCDC197-201ENST00000359253 MRC1P22897 1456 aa17.1■□□□□ 0.33
CCDC197-201ENST00000359253 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
CCDC197-201ENST00000359253 WNK3Q9BYP7 1800 aa17.1■□□□□ 0.33
CCDC197-201ENST00000359253 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
CCDC197-201ENST00000359253 CYP27B1O15528 508 aa17.09■□□□□ 0.33
CCDC197-201ENST00000359253 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
CCDC197-201ENST00000359253 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
CCDC197-201ENST00000359253 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
CCDC197-201ENST00000359253 VIRMAQ69YN4 1812 aaKnown RBP17.09■□□□□ 0.33
CCDC197-201ENST00000359253 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.32
CCDC197-201ENST00000359253 TRIM37O94972 964 aa17.08■□□□□ 0.32
CCDC197-201ENST00000359253 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
CCDC197-201ENST00000359253 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
CCDC197-201ENST00000359253 PLSCR1O15162 318 aa17.07■□□□□ 0.32
CCDC197-201ENST00000359253 BAG6P46379 1132 aa17.07■□□□□ 0.32
CCDC197-201ENST00000359253 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
CCDC197-201ENST00000359253 TCERG1O14776 1098 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms