RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PI4KAP2A4QPH2 592 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 BICD2Q8TD16 824 aa14.73□□□□□ -0.05
COL20A1-201ENST00000358894 PPP1R42Q7Z4L9 355 aa14.72□□□□□ -0.05
COL20A1-201ENST00000358894 GOLGA6L6A8MZA4 724 aa14.72□□□□□ -0.05
COL20A1-201ENST00000358894 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
COL20A1-201ENST00000358894 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
COL20A1-201ENST00000358894 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
COL20A1-201ENST00000358894 SF3A1Q15459 793 aaKnown RBP14.71□□□□□ -0.05
COL20A1-201ENST00000358894 JAKMIP1Q96N16 626 aaKnown RBP14.71□□□□□ -0.05
COL20A1-201ENST00000358894 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
COL20A1-201ENST00000358894 MLH3Q9UHC1 1453 aa14.71□□□□□ -0.05
COL20A1-201ENST00000358894 NPHP1O15259 732 aa14.71□□□□□ -0.06
COL20A1-201ENST00000358894 MSH6P52701 1360 aa14.71□□□□□ -0.06
COL20A1-201ENST00000358894 WDR33Q9C0J8 1336 aaKnown RBP14.71□□□□□ -0.06
COL20A1-201ENST00000358894 RBM25P49756 843 aaKnown RBP14.7□□□□□ -0.06
COL20A1-201ENST00000358894 STK3Q13188 491 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 SPG7Q9UQ90 795 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 TOMM22Q9NS69 142 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 CYP46A1Q9Y6A2 500 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 EVA1CP58658 441 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 ERC1Q8IUD2 1116 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 CASTP20810 708 aaKnown RBP14.7□□□□□ -0.06
COL20A1-201ENST00000358894 PDCL3Q9H2J4 239 aa14.7□□□□□ -0.06
COL20A1-201ENST00000358894 CHL1O00533 1208 aa14.69□□□□□ -0.06
COL20A1-201ENST00000358894 TSPY26PQ9H489 355 aa14.69□□□□□ -0.06
COL20A1-201ENST00000358894 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
COL20A1-201ENST00000358894 TATP17735 454 aaPredicted RBP14.69□□□□□ -0.06
COL20A1-201ENST00000358894 NEO1Q92859 1461 aa14.69□□□□□ -0.06
COL20A1-201ENST00000358894 NRDCO43847 1150 aa14.69□□□□□ -0.06
COL20A1-201ENST00000358894 ZGPATQ8N5A5 531 aaKnown RBP14.69□□□□□ -0.06
COL20A1-201ENST00000358894 RBM27Q9P2N5 1060 aaKnown RBP14.69□□□□□ -0.06
COL20A1-201ENST00000358894 RNF17Q9BXT8 1623 aaKnown RBP14.68□□□□□ -0.06
COL20A1-201ENST00000358894 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 CCDC8Q9H0W5 538 aaPredicted RBP14.68□□□□□ -0.06
COL20A1-201ENST00000358894 USP19O94966 1318 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 FLT4P35916 1363 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 PSMA5P28066 241 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 PRPF40BQ6NWY9 871 aaKnown RBP14.68□□□□□ -0.06
COL20A1-201ENST00000358894 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
COL20A1-201ENST00000358894 CHPF2Q9P2E5 772 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 ABCA6Q8N139 1617 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 TTC21AQ8NDW8 1320 aa14.68□□□□□ -0.06
COL20A1-201ENST00000358894 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
COL20A1-201ENST00000358894 RAB3GAP1Q15042 981 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 FBXW7Q969H0 707 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 TMX3Q96JJ7 454 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 BOLA2Q9H3K6 86 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 SYTL4Q96C24 671 aaPredicted RBP14.67□□□□□ -0.06
COL20A1-201ENST00000358894 METP08581 1390 aa14.67□□□□□ -0.06
COL20A1-201ENST00000358894 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 PDRG1Q9NUG6 133 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 ABCC3O15438 1527 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 USP26Q9BXU7 913 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 ZHX1Q9UKY1 873 aaPredicted RBP14.66□□□□□ -0.06
COL20A1-201ENST00000358894 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
COL20A1-201ENST00000358894 DBF4Q9UBU7 674 aaPredicted RBP14.66□□□□□ -0.06
COL20A1-201ENST00000358894 BECN2A8MW95 431 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 KCNA6P17658 529 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
COL20A1-201ENST00000358894 MTERF4Q7Z6M4 381 aaKnown RBP14.66□□□□□ -0.06
COL20A1-201ENST00000358894 LRRC59Q96AG4 307 aaKnown RBP14.66□□□□□ -0.06
COL20A1-201ENST00000358894 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 APPP05067 770 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
COL20A1-201ENST00000358894 WASHC4Q2M389 1173 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 ESYT1Q9BSJ8 1104 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 MAP3K2Q9Y2U5 619 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 ABCC4O15439 1325 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
COL20A1-201ENST00000358894 ARAP3Q8WWN8 1544 aa14.65□□□□□ -0.06
COL20A1-201ENST00000358894 GSPT1P15170 499 aaKnown RBP14.64□□□□□ -0.07
COL20A1-201ENST00000358894 BLOC1S2Q6QNY1 142 aa14.64□□□□□ -0.07
COL20A1-201ENST00000358894 LAMC1P11047 1609 aa14.64□□□□□ -0.07
COL20A1-201ENST00000358894 CCDC39Q9UFE4 941 aa14.64□□□□□ -0.07
COL20A1-201ENST00000358894 HIP1O00291 1037 aa14.64□□□□□ -0.07
COL20A1-201ENST00000358894 JARID2Q92833 1246 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-201ENST00000358894 CPLX1O14810 134 aa14.63□□□□□ -0.07
COL20A1-201ENST00000358894 CABP4P57796 275 aa14.63□□□□□ -0.07
COL20A1-201ENST00000358894 LTKP29376 864 aa14.63□□□□□ -0.07
COL20A1-201ENST00000358894 HECW2Q9P2P5 1572 aa14.63□□□□□ -0.07
COL20A1-201ENST00000358894 ZNF592Q92610 1267 aa14.63□□□□□ -0.07
COL20A1-201ENST00000358894 PDCP20941 246 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 MYD88Q99836 296 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 RRAGDQ9NQL2 400 aaPredicted RBP14.62□□□□□ -0.07
COL20A1-201ENST00000358894 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 HOXC9P31274 260 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 UQCRHLA0A096LP55 91 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 PNMA6EA0A0J9YXQ4 647 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 UQCRHP07919 91 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 SASS6Q6UVJ0 657 aa14.62□□□□□ -0.07
COL20A1-201ENST00000358894 CCDC85AQ96PX6 553 aaPredicted RBP14.62□□□□□ -0.07
COL20A1-201ENST00000358894 ZSCAN30Q86W11 494 aa14.61□□□□□ -0.07
COL20A1-201ENST00000358894 SIRT2Q8IXJ6 389 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms