RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ZKSCAN2Q63HK3 967 aa21.89■■□□□ 1.09
TPM1-205ENST00000357980 SOS1Q07889 1333 aaPredicted RBP21.88■■□□□ 1.09
TPM1-205ENST00000357980 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
TPM1-205ENST00000357980 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
TPM1-205ENST00000357980 SPATA31A1Q5TZJ5 1347 aa21.88■■□□□ 1.09
TPM1-205ENST00000357980 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
TPM1-205ENST00000357980 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
TPM1-205ENST00000357980 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
TPM1-205ENST00000357980 RLBP1P12271 317 aa21.87■■□□□ 1.09
TPM1-205ENST00000357980 TRIM27P14373 513 aa21.87■■□□□ 1.09
TPM1-205ENST00000357980 EIF4A1P60842 406 aaKnown RBP21.87■■□□□ 1.09
TPM1-205ENST00000357980 PANK1Q8TE04 598 aa21.87■■□□□ 1.09
TPM1-205ENST00000357980 TOGARAM1Q9Y4F4 1720 aa21.86■■□□□ 1.09
TPM1-205ENST00000357980 BCL9LQ86UU0 1499 aa21.86■■□□□ 1.09
TPM1-205ENST00000357980 ATF7IPQ6VMQ6 1270 aa21.86■■□□□ 1.09
TPM1-205ENST00000357980 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.86■■□□□ 1.09
TPM1-205ENST00000357980 CACNA1FO60840 1977 aa21.86■■□□□ 1.09
TPM1-205ENST00000357980 KCNQ3O43525 872 aa21.85■■□□□ 1.09
TPM1-205ENST00000357980 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
TPM1-205ENST00000357980 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
TPM1-205ENST00000357980 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
TPM1-205ENST00000357980 THRAP3Q9Y2W1 955 aaKnown RBP21.85■■□□□ 1.09
TPM1-205ENST00000357980 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
TPM1-205ENST00000357980 B4GALNT3Q6L9W6 998 aa21.84■■□□□ 1.09
TPM1-205ENST00000357980 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
TPM1-205ENST00000357980 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
TPM1-205ENST00000357980 TNS2Q63HR2 1409 aa21.83■■□□□ 1.09
TPM1-205ENST00000357980 UNC5CLQ8IV45 518 aa21.83■■□□□ 1.09
TPM1-205ENST00000357980 FNBP4Q8N3X1 1017 aaPredicted RBP21.83■■□□□ 1.09
TPM1-205ENST00000357980 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.09
TPM1-205ENST00000357980 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.09
TPM1-205ENST00000357980 DZIP1LQ8IYY4 767 aaKnown RBP21.83■■□□□ 1.08
TPM1-205ENST00000357980 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.08
TPM1-205ENST00000357980 HOXB7P09629 217 aa21.82■■□□□ 1.08
TPM1-205ENST00000357980 MS4A1P11836 297 aa21.82■■□□□ 1.08
TPM1-205ENST00000357980 DDX54Q8TDD1 881 aaKnown RBP21.82■■□□□ 1.08
TPM1-205ENST00000357980 NGLY1Q96IV0 654 aa21.82■■□□□ 1.08
TPM1-205ENST00000357980 COG6Q9Y2V7 657 aa21.82■■□□□ 1.08
TPM1-205ENST00000357980 CDCA7Q9BWT1 371 aaPredicted RBP21.81■■□□□ 1.08
TPM1-205ENST00000357980 PAPPAQ13219 1627 aa21.81■■□□□ 1.08
TPM1-205ENST00000357980 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
TPM1-205ENST00000357980 ERVV-2B6SEH9 535 aa21.8■■□□□ 1.08
TPM1-205ENST00000357980 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
TPM1-205ENST00000357980 CABP4P57796 275 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 CCDC136Q96JN2 1154 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 C5P01031 1676 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 GLI3P10071 1580 aa21.79■■□□□ 1.08
TPM1-205ENST00000357980 CCDC30Q5VVM6 783 aa21.78■■□□□ 1.08
TPM1-205ENST00000357980 RGS12O14924 1447 aa21.78■■□□□ 1.08
TPM1-205ENST00000357980 MVPQ14764 893 aaKnown RBP21.78■■□□□ 1.08
TPM1-205ENST00000357980 VPS72Q15906 364 aa21.78■■□□□ 1.08
TPM1-205ENST00000357980 ITGB4P16144 1822 aa21.77■■□□□ 1.08
TPM1-205ENST00000357980 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
TPM1-205ENST00000357980 EXOC5O00471 708 aa21.76■■□□□ 1.07
TPM1-205ENST00000357980 GIGYF1O75420 1035 aaPredicted RBP21.76■■□□□ 1.07
TPM1-205ENST00000357980 SLC4A2P04920 1241 aa21.76■■□□□ 1.07
TPM1-205ENST00000357980 ABCC4O15439 1325 aa21.76■■□□□ 1.07
TPM1-205ENST00000357980 HDGFL1Q5TGJ6 251 aa21.76■■□□□ 1.07
TPM1-205ENST00000357980 PTPRCP08575 1304 aa21.75■■□□□ 1.07
TPM1-205ENST00000357980 TMEM57Q8N5G2 664 aa21.75■■□□□ 1.07
TPM1-205ENST00000357980 STK31Q9BXU1 1019 aa21.75■■□□□ 1.07
TPM1-205ENST00000357980 CCDC9Q9Y3X0 531 aaKnown RBP21.75■■□□□ 1.07
TPM1-205ENST00000357980 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
TPM1-205ENST00000357980 AAMPQ13685 434 aa21.73■■□□□ 1.07
TPM1-205ENST00000357980 USP21Q9UK80 565 aa21.73■■□□□ 1.07
TPM1-205ENST00000357980 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
TPM1-205ENST00000357980 CHMP4AQ9BY43 222 aa21.73■■□□□ 1.07
TPM1-205ENST00000357980 LAMB4A4D0S4 1761 aa21.72■■□□□ 1.07
TPM1-205ENST00000357980 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
TPM1-205ENST00000357980 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
TPM1-205ENST00000357980 DDB1Q16531 1140 aa21.72■■□□□ 1.07
TPM1-205ENST00000357980 G2E3Q7L622 706 aa21.72■■□□□ 1.07
TPM1-205ENST00000357980 ZNF496Q96IT1 587 aaPredicted RBP21.72■■□□□ 1.07
TPM1-205ENST00000357980 ITPRIPQ8IWB1 547 aa21.71■■□□□ 1.07
TPM1-205ENST00000357980 THSD7AQ9UPZ6 1657 aa21.71■■□□□ 1.07
TPM1-205ENST00000357980 PRAMEF22A3QJZ6 481 aa21.71■■□□□ 1.07
TPM1-205ENST00000357980 MEX3CQ5U5Q3 659 aaKnown RBP21.71■■□□□ 1.07
TPM1-205ENST00000357980 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
TPM1-205ENST00000357980 DDX19BQ9UMR2 479 aa21.71■■□□□ 1.07
TPM1-205ENST00000357980 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.07
TPM1-205ENST00000357980 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
TPM1-205ENST00000357980 FMNL2Q96PY5 1086 aa21.69■■□□□ 1.06
TPM1-205ENST00000357980 FLIIQ13045 1269 aa21.69■■□□□ 1.06
TPM1-205ENST00000357980 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
TPM1-205ENST00000357980 AFF2P51816 1311 aa21.68■■□□□ 1.06
TPM1-205ENST00000357980 FAM98CQ17RN3 349 aaKnown RBP21.68■■□□□ 1.06
TPM1-205ENST00000357980 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
TPM1-205ENST00000357980 BCL9O00512 1426 aa21.67■■□□□ 1.06
TPM1-205ENST00000357980 ATRNO75882 1429 aa21.67■■□□□ 1.06
TPM1-205ENST00000357980 SNRPA1P09661 255 aaKnown RBP21.66■■□□□ 1.06
TPM1-205ENST00000357980 INTS3Q68E01 1043 aaKnown RBP21.66■■□□□ 1.06
TPM1-205ENST00000357980 MARCH10Q8NA82 808 aaPredicted RBP21.66■■□□□ 1.06
TPM1-205ENST00000357980 PIGBQ92521 554 aa21.66■■□□□ 1.06
TPM1-205ENST00000357980 DBF4Q9UBU7 674 aaPredicted RBP21.66■■□□□ 1.06
TPM1-205ENST00000357980 KDM2BQ8NHM5 1336 aa21.65■■□□□ 1.06
TPM1-205ENST00000357980 ZBTB40Q9NUA8 1239 aa21.65■■□□□ 1.06
TPM1-205ENST00000357980 KAT6BQ8WYB5 2073 aa21.65■■□□□ 1.06
TPM1-205ENST00000357980 PHAXQ9H814 394 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms