RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
IFT20-202ENST00000357896 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
IFT20-202ENST00000357896 C16orf71Q8IYS4 520 aaPredicted RBP22.11■■□□□ 1.13
IFT20-202ENST00000357896 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
IFT20-202ENST00000357896 NMRK2Q9NPI5 230 aa22.11■■□□□ 1.13
IFT20-202ENST00000357896 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
IFT20-202ENST00000357896 FCHSD2O94868 740 aa22.1■■□□□ 1.13
IFT20-202ENST00000357896 NCAPD2Q15021 1401 aa22.1■■□□□ 1.13
IFT20-202ENST00000357896 CDCA8Q53HL2 280 aa22.1■■□□□ 1.13
IFT20-202ENST00000357896 EMILIN1Q9Y6C2 1016 aa22.1■■□□□ 1.13
IFT20-202ENST00000357896 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
IFT20-202ENST00000357896 ADRA2BP18089 450 aa22.09■■□□□ 1.13
IFT20-202ENST00000357896 ATG3Q9NT62 314 aa22.09■■□□□ 1.13
IFT20-202ENST00000357896 KIF13BQ9NQT8 1826 aa22.08■■□□□ 1.13
IFT20-202ENST00000357896 C10orf71Q711Q0 1435 aa22.08■■□□□ 1.13
IFT20-202ENST00000357896 PHKG2P15735 406 aa22.08■■□□□ 1.13
IFT20-202ENST00000357896 DPEP1P16444 411 aa22.08■■□□□ 1.13
IFT20-202ENST00000357896 FSTL1Q12841 308 aa22.07■■□□□ 1.12
IFT20-202ENST00000357896 RC3H1Q5TC82 1133 aaKnown RBP22.07■■□□□ 1.12
IFT20-202ENST00000357896 KLRG1Q96E93 195 aa22.07■■□□□ 1.12
IFT20-202ENST00000357896 PARP3Q9Y6F1 533 aa22.07■■□□□ 1.12
IFT20-202ENST00000357896 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
IFT20-202ENST00000357896 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
IFT20-202ENST00000357896 C9orf131Q5VYM1 1079 aa22.06■■□□□ 1.12
IFT20-202ENST00000357896 RFC4P35249 363 aa22.05■■□□□ 1.12
IFT20-202ENST00000357896 ARHGEF1Q92888 912 aaKnown RBP22.05■■□□□ 1.12
IFT20-202ENST00000357896 EYA1Q99502 592 aa22.05■■□□□ 1.12
IFT20-202ENST00000357896 KIF20BQ96Q89 1820 aa22.05■■□□□ 1.12
IFT20-202ENST00000357896 KDM2BQ8NHM5 1336 aa22.05■■□□□ 1.12
IFT20-202ENST00000357896 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
IFT20-202ENST00000357896 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
IFT20-202ENST00000357896 JMYQ8N9B5 988 aa22.04■■□□□ 1.12
IFT20-202ENST00000357896 GYS1P13807 737 aa22.03■■□□□ 1.12
IFT20-202ENST00000357896 PIM2Q9P1W9 311 aa22.03■■□□□ 1.12
IFT20-202ENST00000357896 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
IFT20-202ENST00000357896 RPS6KA4O75676 772 aa22.02■■□□□ 1.12
IFT20-202ENST00000357896 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
IFT20-202ENST00000357896 WDR90Q96KV7 1748 aa22.02■■□□□ 1.12
IFT20-202ENST00000357896 CNTNAP4Q9C0A0 1308 aa22.02■■□□□ 1.12
IFT20-202ENST00000357896 KDRP35968 1356 aa22.01■■□□□ 1.11
IFT20-202ENST00000357896 KCNA3P22001 575 aa22.01■■□□□ 1.11
IFT20-202ENST00000357896 COL13A1Q5TAT6 717 aaPredicted RBP22.01■■□□□ 1.11
IFT20-202ENST00000357896 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
IFT20-202ENST00000357896 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
IFT20-202ENST00000357896 DALRD3Q5D0E6 543 aaKnown RBP22■■□□□ 1.11
IFT20-202ENST00000357896 C4AP0C0L4 1744 aa22■■□□□ 1.11
IFT20-202ENST00000357896 HTRA3P83110 453 aa21.99■■□□□ 1.11
IFT20-202ENST00000357896 DCAF5Q96JK2 942 aa21.99■■□□□ 1.11
IFT20-202ENST00000357896 SLC4A9Q96Q91 983 aa21.99■■□□□ 1.11
IFT20-202ENST00000357896 RRAGCQ9HB90 399 aa21.97■■□□□ 1.11
IFT20-202ENST00000357896 RNF181Q9P0P0 153 aa21.97■■□□□ 1.11
IFT20-202ENST00000357896 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
IFT20-202ENST00000357896 POLKQ9UBT6 870 aa21.96■■□□□ 1.11
IFT20-202ENST00000357896 TNS4Q8IZW8 715 aa21.95■■□□□ 1.1
IFT20-202ENST00000357896 SMC1BQ8NDV3 1235 aa21.95■■□□□ 1.1
IFT20-202ENST00000357896 KCPQ6ZWJ8 1503 aa21.95■■□□□ 1.1
IFT20-202ENST00000357896 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
IFT20-202ENST00000357896 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
IFT20-202ENST00000357896 PCNTO95613 3336 aa21.94■■□□□ 1.1
IFT20-202ENST00000357896 CABP4P57796 275 aa21.94■■□□□ 1.1
IFT20-202ENST00000357896 ARFGEF1Q9Y6D6 1849 aa21.94■■□□□ 1.1
IFT20-202ENST00000357896 CAPN15O75808 1086 aa21.93■■□□□ 1.1
IFT20-202ENST00000357896 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
IFT20-202ENST00000357896 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
IFT20-202ENST00000357896 PRELPP51888 382 aa21.91■■□□□ 1.1
IFT20-202ENST00000357896 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
IFT20-202ENST00000357896 ZC3H4Q9UPT8 1303 aaKnown RBP21.9■■□□□ 1.1
IFT20-202ENST00000357896 COL5A3P25940 1745 aaPredicted RBP21.9■■□□□ 1.1
IFT20-202ENST00000357896 FKBP8Q14318 412 aa21.9■■□□□ 1.1
IFT20-202ENST00000357896 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
IFT20-202ENST00000357896 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
IFT20-202ENST00000357896 CRKLP46109 303 aaKnown RBP21.89■■□□□ 1.09
IFT20-202ENST00000357896 CHRNA5P30532 468 aa21.88■■□□□ 1.09
IFT20-202ENST00000357896 MTHFSP49914 203 aa21.88■■□□□ 1.09
IFT20-202ENST00000357896 DDR1Q08345 913 aa21.88■■□□□ 1.09
IFT20-202ENST00000357896 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
IFT20-202ENST00000357896 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
IFT20-202ENST00000357896 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
IFT20-202ENST00000357896 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
IFT20-202ENST00000357896 ZPR1O75312 459 aa21.85■■□□□ 1.09
IFT20-202ENST00000357896 TM4SF1P30408 202 aa21.85■■□□□ 1.09
IFT20-202ENST00000357896 TNNT2P45379 298 aaPredicted RBP21.85■■□□□ 1.09
IFT20-202ENST00000357896 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
IFT20-202ENST00000357896 NFATC2IPQ8NCF5 419 aa21.85■■□□□ 1.09
IFT20-202ENST00000357896 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
IFT20-202ENST00000357896 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
IFT20-202ENST00000357896 POLRMTO00411 1230 aaKnown RBP21.84■■□□□ 1.09
IFT20-202ENST00000357896 LMNB1P20700 586 aa21.84■■□□□ 1.09
IFT20-202ENST00000357896 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
IFT20-202ENST00000357896 INTS5Q6P9B9 1019 aaKnown RBP21.81■■□□□ 1.08
IFT20-202ENST00000357896 SBF1O95248 1867 aa21.81■■□□□ 1.08
IFT20-202ENST00000357896 HSPA1AP0DMV8 641 aaKnown RBP21.8■■□□□ 1.08
IFT20-202ENST00000357896 HSPA1BP0DMV9 641 aaKnown RBP21.8■■□□□ 1.08
IFT20-202ENST00000357896 RASSF7Q02833 373 aa21.79■■□□□ 1.08
IFT20-202ENST00000357896 USPL1Q5W0Q7 1092 aa21.79■■□□□ 1.08
IFT20-202ENST00000357896 TTLL6Q8N841 843 aa21.78■■□□□ 1.08
IFT20-202ENST00000357896 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
IFT20-202ENST00000357896 NARFQ9UHQ1 456 aa21.76■■□□□ 1.07
IFT20-202ENST00000357896 NFIXQ14938 502 aa21.75■■□□□ 1.07
IFT20-202ENST00000357896 SOS1Q07889 1333 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 405 ms