RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 IFT57Q9NWB7 429 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 KRT24Q2M2I5 525 aa15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 CYP27B1O15528 508 aa15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 SPATA31A6Q5VVP1 1343 aa15.95■□□□□ 0.14
RTFDC1-202ENST00000357348 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 ZNF853P0CG23 659 aa15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 PHKG2P15735 406 aa15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 L1TD1Q5T7N2 865 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-202ENST00000357348 PARP4Q9UKK3 1724 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-202ENST00000357348 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
RTFDC1-202ENST00000357348 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
RTFDC1-202ENST00000357348 SLIT2O94813 1529 aa15.93■□□□□ 0.14
RTFDC1-202ENST00000357348 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
RTFDC1-202ENST00000357348 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
RTFDC1-202ENST00000357348 IFNL2Q8IZJ0 200 aa15.92■□□□□ 0.14
RTFDC1-202ENST00000357348 TEFQ10587 303 aa15.92■□□□□ 0.14
RTFDC1-202ENST00000357348 PCDHB15Q9Y5E8 787 aa15.92■□□□□ 0.14
RTFDC1-202ENST00000357348 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 USP21Q9UK80 565 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 PKD1L3Q7Z443 1732 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 CHL1O00533 1208 aa15.91■□□□□ 0.14
RTFDC1-202ENST00000357348 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 TBC1D2Q9BYX2 928 aa15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■□□□□ 9.7
RTFDC1-202ENST00000357348 BCL9LQ86UU0 1499 aa15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
RTFDC1-202ENST00000357348 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 RLBP1P12271 317 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 LRRC37A3O60309 1634 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 SHANK3Q9BYB0 1731 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 PCDH11XQ9BZA7 1347 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 PCDH11YQ9BZA8 1340 aa15.89■□□□□ 0.13
RTFDC1-202ENST00000357348 A0A0G2JS52 829 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 KCNQ3O43525 872 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 FAM98CQ17RN3 349 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 NFATC2IPQ8NCF5 419 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 SPATA31A7Q8IWB4 1347 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 SCN11AQ9UI33 1791 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 FSD2A1L4K1 749 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 AFF2P51816 1311 aa15.88■□□□□ 0.13
RTFDC1-202ENST00000357348 FNBP4Q8N3X1 1017 aaPredicted RBP15.87■□□□□ 0.13
RTFDC1-202ENST00000357348 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
RTFDC1-202ENST00000357348 EXOC5O00471 708 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 SSH1Q8WYL5 1049 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 NECTIN2Q92692 538 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 VAMP4O75379 141 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
RTFDC1-202ENST00000357348 WNK3Q9BYP7 1800 aa15.85■□□□□ 0.13
RTFDC1-202ENST00000357348 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
RTFDC1-202ENST00000357348 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 RRAGDQ9NQL2 400 aaPredicted RBP15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 CABP4P57796 275 aa15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 VPS72Q15906 364 aa15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 DDB1Q16531 1140 aa15.84■□□□□ 0.13
RTFDC1-202ENST00000357348 MCM4P33991 863 aa15.83■□□□□ 0.13
RTFDC1-202ENST00000357348 MVPQ14764 893 aaKnown RBP15.83■□□□□ 0.13
RTFDC1-202ENST00000357348 HSP90AB1P08238 724 aaKnown RBP15.83■□□□□ 0.12
RTFDC1-202ENST00000357348 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.12
RTFDC1-202ENST00000357348 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
RTFDC1-202ENST00000357348 ADAMTS7Q9UKP4 1686 aa15.82■□□□□ 0.12
RTFDC1-202ENST00000357348 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
RTFDC1-202ENST00000357348 KDM3BQ7LBC6 1761 aa15.81■□□□□ 0.12
RTFDC1-202ENST00000357348 PRAMEF22A3QJZ6 481 aa15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 EIF2S2P20042 333 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 HDAC1Q13547 482 aaPredicted RBP15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 CHMP5Q9NZZ3 219 aa15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 FAM182BQ5T319 152 aa15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
RTFDC1-202ENST00000357348 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 GOLGA6L3A6NEY3 463 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 BARGINQ6ZT62 677 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 EP400Q96L91 3159 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 NKX1-1Q15270 411 aaPredicted RBP15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 ZKSCAN2Q63HK3 967 aa15.79■□□□□ 0.12
RTFDC1-202ENST00000357348 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms