RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 NUCB2P80303 420 aa15.05■□□□□ -0
SFPQ-201ENST00000357214 GNAI3P08754 354 aa15.05■□□□□ -0
SFPQ-201ENST00000357214 KCNA6P17658 529 aa15.05■□□□□ -0
SFPQ-201ENST00000357214 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
SFPQ-201ENST00000357214 SNX21Q969T3 373 aa15.05■□□□□ -0
SFPQ-201ENST00000357214 TSHZ3Q63HK5 1081 aa15.04■□□□□ -0
SFPQ-201ENST00000357214 PTPRMP28827 1452 aa15.04■□□□□ -0
SFPQ-201ENST00000357214 PNPLA6Q8IY17 1366 aa15.04■□□□□ -0
SFPQ-201ENST00000357214 UBTFL1P0CB47 393 aaPredicted RBP15.04■□□□□ -0
SFPQ-201ENST00000357214 SIRT2Q8IXJ6 389 aa15.04■□□□□ -0
SFPQ-201ENST00000357214 PPLO60437 1756 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 ERC2O15083 957 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 SDSP20132 328 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 TEFQ10587 303 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
SFPQ-201ENST00000357214 ZBTB9Q96C00 473 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 ABCC4O15439 1325 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 FAM135BQ49AJ0 1406 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 CEP85Q6P2H3 762 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 HDGFL1Q5TGJ6 251 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 TEX2Q8IWB9 1127 aa15.03■□□□□ -0
SFPQ-201ENST00000357214 ZNF853P0CG23 659 aa15.02■□□□□ -0
SFPQ-201ENST00000357214 G2E3Q7L622 706 aa15.02■□□□□ -0
SFPQ-201ENST00000357214 PTPRCP08575 1304 aa15.02■□□□□ -0
SFPQ-201ENST00000357214 CHL1O00533 1208 aa15.02□□□□□ -0.01
SFPQ-201ENST00000357214 DDX17Q92841 729 aaKnown RBP15.02□□□□□ -0.01
SFPQ-201ENST00000357214 LRRCC1Q9C099 1032 aa15.02□□□□□ -0.01
SFPQ-201ENST00000357214 IL1RAPL2Q9NP60 686 aa15.02□□□□□ -0.01
SFPQ-201ENST00000357214 NLRP2Q9NX02 1062 aa15.02□□□□□ -0.01
SFPQ-201ENST00000357214 TAOK2Q9UL54 1235 aa15.02□□□□□ -0.01
SFPQ-201ENST00000357214 CCDC9Q9Y3X0 531 aaKnown RBP15.02□□□□□ -0.01
SFPQ-201ENST00000357214 SURF6O75683 361 aaKnown RBP15.02□□□□□ -0.01
SFPQ-201ENST00000357214 MAP3K19Q56UN5 1328 aa15.01□□□□□ -0.01
SFPQ-201ENST00000357214 MYO3AQ8NEV4 1616 aa15.01□□□□□ -0.01
SFPQ-201ENST00000357214 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
SFPQ-201ENST00000357214 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
SFPQ-201ENST00000357214 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
SFPQ-201ENST00000357214 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
SFPQ-201ENST00000357214 PIK3C2BO00750 1634 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 ATP2B3Q16720 1220 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 APPP05067 770 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 TRERF1Q96PN7 1200 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 PRPF40AO75400 957 aaKnown RBP15□□□□□ -0.01
SFPQ-201ENST00000357214 FLIIQ13045 1269 aa15□□□□□ -0.01
SFPQ-201ENST00000357214 ATP7BP35670 1465 aa14.99□□□□□ -0.01
SFPQ-201ENST00000357214 GSPT1P15170 499 aaKnown RBP14.99□□□□□ -0.01
SFPQ-201ENST00000357214 ARHGEF40Q8TER5 1519 aa14.99□□□□□ -0.01
SFPQ-201ENST00000357214 MPNDQ8N594 471 aa14.99□□□□□ -0.01
SFPQ-201ENST00000357214 EYA1Q99502 592 aa14.99□□□□□ -0.01
SFPQ-201ENST00000357214 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
SFPQ-201ENST00000357214 PPP1R9BQ96SB3 815 aa14.99□□□□□ -0.01
SFPQ-201ENST00000357214 MSH6P52701 1360 aa14.98□□□□□ -0.01
SFPQ-201ENST00000357214 ZC3H13Q5T200 1668 aaKnown RBP14.98□□□□□ -0.01
SFPQ-201ENST00000357214 ATF3P18847 181 aa14.98□□□□□ -0.01
SFPQ-201ENST00000357214 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
SFPQ-201ENST00000357214 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
SFPQ-201ENST00000357214 IRX5P78411 483 aaPredicted RBP14.98□□□□□ -0.01
SFPQ-201ENST00000357214 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
SFPQ-201ENST00000357214 A2ML1A8K2U0 1454 aa14.98□□□□□ -0.01
SFPQ-201ENST00000357214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.97□□□□□ -0.01
SFPQ-201ENST00000357214 LRRFIP2Q9Y608 721 aaKnown RBP14.97□□□□□ -0.01
SFPQ-201ENST00000357214 AATKQ6ZMQ8 1374 aa14.97□□□□□ -0.01
SFPQ-201ENST00000357214 RAB3GAP1Q15042 981 aa14.97□□□□□ -0.01
SFPQ-201ENST00000357214 SHPRHQ149N8 1683 aa14.97□□□□□ -0.01
SFPQ-201ENST00000357214 MED14O60244 1454 aa14.97□□□□□ -0.01
SFPQ-201ENST00000357214 AIMP1Q12904 312 aaKnown RBP14.97□□□□□ -0.01
SFPQ-201ENST00000357214 C9orf78Q9NZ63 289 aaPredicted RBP14.97□□□□□ -0.01
SFPQ-201ENST00000357214 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
SFPQ-201ENST00000357214 BAG4O95429 457 aaKnown RBP14.96□□□□□ -0.01
SFPQ-201ENST00000357214 MX1P20591 662 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 PDE1AP54750 535 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 C1orf141Q5JVX7 400 aa14.96□□□□□ -0.01
SFPQ-201ENST00000357214 TNNT3P45378 269 aaPredicted RBP14.95□□□□□ -0.02
SFPQ-201ENST00000357214 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
SFPQ-201ENST00000357214 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
SFPQ-201ENST00000357214 SRCIN1Q9C0H9 1055 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 PDCL2Q8N4E4 241 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 TRIM34Q9BYJ4 488 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
SFPQ-201ENST00000357214 STRN4Q9NRL3 753 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 DNAJC2Q99543 621 aaKnown RBP14.95□□□□□ -0.02
SFPQ-201ENST00000357214 ROBO2Q9HCK4 1378 aa14.95□□□□□ -0.02
SFPQ-201ENST00000357214 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
SFPQ-201ENST00000357214 RGS22Q8NE09 1264 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
SFPQ-201ENST00000357214 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
SFPQ-201ENST00000357214 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 TMEM2Q9UHN6 1383 aa14.94□□□□□ -0.02
SFPQ-201ENST00000357214 SRGAP3O43295 1099 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms