RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
VPS13B-201ENST00000355155 SPG7Q9UQ90 795 aa21.88■■□□□ 1.09
VPS13B-201ENST00000355155 EIF4A1P60842 406 aaKnown RBP21.88■■□□□ 1.09
VPS13B-201ENST00000355155 PHLPP1O60346 1717 aa21.87■■□□□ 1.09
VPS13B-201ENST00000355155 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
VPS13B-201ENST00000355155 ELL2O00472 640 aaPredicted RBP21.86■■□□□ 1.09
VPS13B-201ENST00000355155 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
VPS13B-201ENST00000355155 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
VPS13B-201ENST00000355155 GLI3P10071 1580 aa21.86■■□□□ 1.09
VPS13B-201ENST00000355155 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
VPS13B-201ENST00000355155 PHKG2P15735 406 aa21.85■■□□□ 1.09
VPS13B-201ENST00000355155 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
VPS13B-201ENST00000355155 UBR2Q8IWV8 1755 aa21.85■■□□□ 1.09
VPS13B-201ENST00000355155 NRAPQ86VF7 1730 aa21.84■■□□□ 1.09
VPS13B-201ENST00000355155 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
VPS13B-201ENST00000355155 NLRP2Q9NX02 1062 aa21.84■■□□□ 1.09
VPS13B-201ENST00000355155 LAMB4A4D0S4 1761 aa21.83■■□□□ 1.09
VPS13B-201ENST00000355155 CHRNA2Q15822 529 aa21.83■■□□□ 1.09
VPS13B-201ENST00000355155 PRDM11Q9NQV5 511 aa21.83■■□□□ 1.09
VPS13B-201ENST00000355155 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.08
VPS13B-201ENST00000355155 SMC5Q8IY18 1101 aa21.83■■□□□ 1.08
VPS13B-201ENST00000355155 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
VPS13B-201ENST00000355155 TEFQ10587 303 aa21.81■■□□□ 1.08
VPS13B-201ENST00000355155 NKX1-1Q15270 411 aaPredicted RBP21.81■■□□□ 1.08
VPS13B-201ENST00000355155 C5P01031 1676 aa21.81■■□□□ 1.08
VPS13B-201ENST00000355155 LRP6O75581 1613 aa21.81■■□□□ 1.08
VPS13B-201ENST00000355155 DISP2A7MBM2 1401 aa21.81■■□□□ 1.08
VPS13B-201ENST00000355155 NWD2Q9ULI1 1742 aa21.8■■□□□ 1.08
VPS13B-201ENST00000355155 SLC4A2P04920 1241 aa21.8■■□□□ 1.08
VPS13B-201ENST00000355155 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
VPS13B-201ENST00000355155 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
VPS13B-201ENST00000355155 MPRIPQ6WCQ1 1025 aa21.79■■□□□ 1.08
VPS13B-201ENST00000355155 STK31Q9BXU1 1019 aa21.79■■□□□ 1.08
VPS13B-201ENST00000355155 SLC52A2Q9HAB3 445 aa21.79■■□□□ 1.08
VPS13B-201ENST00000355155 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
VPS13B-201ENST00000355155 CSB-PGBD3P0DP91 1061 aa21.78■■□□□ 1.08
VPS13B-201ENST00000355155 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
VPS13B-201ENST00000355155 BACH2Q9BYV9 841 aa21.78■■□□□ 1.08
VPS13B-201ENST00000355155 CYP27B1O15528 508 aa21.77■■□□□ 1.08
VPS13B-201ENST00000355155 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
VPS13B-201ENST00000355155 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
VPS13B-201ENST00000355155 TOGARAM1Q9Y4F4 1720 aa21.76■■□□□ 1.07
VPS13B-201ENST00000355155 FLIIQ13045 1269 aa21.75■■□□□ 1.07
VPS13B-201ENST00000355155 G2E3Q7L622 706 aa21.75■■□□□ 1.07
VPS13B-201ENST00000355155 GIGYF1O75420 1035 aaPredicted RBP21.74■■□□□ 1.07
VPS13B-201ENST00000355155 PDE4AP27815 886 aa21.73■■□□□ 1.07
VPS13B-201ENST00000355155 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
VPS13B-201ENST00000355155 HDGFL1Q5TGJ6 251 aa21.73■■□□□ 1.07
VPS13B-201ENST00000355155 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
VPS13B-201ENST00000355155 KCNQ3O43525 872 aa21.72■■□□□ 1.07
VPS13B-201ENST00000355155 IL2RBP14784 551 aa21.72■■□□□ 1.07
VPS13B-201ENST00000355155 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
VPS13B-201ENST00000355155 ERVV-2B6SEH9 535 aa21.71■■□□□ 1.07
VPS13B-201ENST00000355155 RPAP2Q8IXW5 612 aaPredicted RBP21.71■■□□□ 1.07
VPS13B-201ENST00000355155 PLEKHG5O94827 1062 aa21.7■■□□□ 1.07
VPS13B-201ENST00000355155 TOM1L2Q6ZVM7 507 aa21.7■■□□□ 1.07
VPS13B-201ENST00000355155 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.07
VPS13B-201ENST00000355155 ZNF790Q6PG37 636 aa21.7■■□□□ 1.06
VPS13B-201ENST00000355155 SIRT2Q8IXJ6 389 aa21.7■■□□□ 1.06
VPS13B-201ENST00000355155 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.06
VPS13B-201ENST00000355155 NUCB1Q02818 461 aa21.7■■□□□ 1.06
VPS13B-201ENST00000355155 ANKRD44Q8N8A2 993 aa21.7■■□□□ 1.06
VPS13B-201ENST00000355155 FAM161AQ3B820 660 aa21.68■■□□□ 1.06
VPS13B-201ENST00000355155 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
VPS13B-201ENST00000355155 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
VPS13B-201ENST00000355155 C8orf34Q49A92 452 aa21.67■■□□□ 1.06
VPS13B-201ENST00000355155 TOM1O60784 492 aa21.66■■□□□ 1.06
VPS13B-201ENST00000355155 SLIT2O94813 1529 aa21.66■■□□□ 1.06
VPS13B-201ENST00000355155 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
VPS13B-201ENST00000355155 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
VPS13B-201ENST00000355155 CICQ96RK0 1608 aaPredicted RBP21.64■■□□□ 1.06
VPS13B-201ENST00000355155 ITGB4P16144 1822 aa21.64■■□□□ 1.06
VPS13B-201ENST00000355155 CEP85Q6P2H3 762 aa21.64■■□□□ 1.05
VPS13B-201ENST00000355155 HYPKQ9NX55 129 aa21.64■■□□□ 1.05
VPS13B-201ENST00000355155 ERBB4Q15303 1308 aa21.64■■□□□ 1.05
VPS13B-201ENST00000355155 ADCY9O60503 1353 aa21.64■■□□□ 1.05
VPS13B-201ENST00000355155 DDX21Q9NR30 783 aaKnown RBP eCLIP21.63■■□□□ 1.05
VPS13B-201ENST00000355155 CHPF2Q9P2E5 772 aa21.63■■□□□ 1.05
VPS13B-201ENST00000355155 GNAI3P08754 354 aa21.63■■□□□ 1.05
VPS13B-201ENST00000355155 PDIA6Q15084 440 aa21.63■■□□□ 1.05
VPS13B-201ENST00000355155 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
VPS13B-201ENST00000355155 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.62■■□□□ 1.05
VPS13B-201ENST00000355155 EVA1CP58658 441 aa21.62■■□□□ 1.05
VPS13B-201ENST00000355155 FKBP5Q13451 457 aaPredicted RBP21.62■■□□□ 1.05
VPS13B-201ENST00000355155 MEIS3Q99687 375 aa21.62■■□□□ 1.05
VPS13B-201ENST00000355155 BTG4Q9NY30 223 aa21.62■■□□□ 1.05
VPS13B-201ENST00000355155 THRAP3Q9Y2W1 955 aaKnown RBP21.62■■□□□ 1.05
VPS13B-201ENST00000355155 LRP10Q7Z4F1 713 aa21.61■■□□□ 1.05
VPS13B-201ENST00000355155 CDCA7Q9BWT1 371 aaPredicted RBP21.61■■□□□ 1.05
VPS13B-201ENST00000355155 PHAXQ9H814 394 aaKnown RBP21.61■■□□□ 1.05
VPS13B-201ENST00000355155 F6X3S4 739 aa21.6■■□□□ 1.05
VPS13B-201ENST00000355155 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
VPS13B-201ENST00000355155 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
VPS13B-201ENST00000355155 CHD1LQ86WJ1 897 aa21.6■■□□□ 1.05
VPS13B-201ENST00000355155 FMNL2Q96PY5 1086 aa21.6■■□□□ 1.05
VPS13B-201ENST00000355155 NUP188Q5SRE5 1749 aa21.59■■□□□ 1.05
VPS13B-201ENST00000355155 CABP4P57796 275 aa21.59■■□□□ 1.05
VPS13B-201ENST00000355155 ALDH1L1O75891 902 aa21.58■■□□□ 1.05
VPS13B-201ENST00000355155 ARFGEF2Q9Y6D5 1785 aa21.58■■□□□ 1.05
VPS13B-201ENST00000355155 GNAI2P04899 355 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms