RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 TMEM266Q2M3C6 531 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 MICALCLQ6ZW33 695 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 GRPEL1Q9HAV7 217 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 TCP11L2Q8N4U5 519 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 U3KPZ7 1027 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 PPP6R1Q9UPN7 881 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 SRGAP3O43295 1099 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 KIF4BQ2VIQ3 1234 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 TOP1P11387 765 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 SPECC1Q5M775 1068 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 ZPR1O75312 459 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 LIG1P18858 919 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 EXOSC9Q06265 439 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 PTPN14Q15678 1187 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 CCDC96Q2M329 555 aa6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 FERMT1Q9BQL6 677 aa6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 PTPRGP23470 1445 aa6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 SFPQP23246 707 aaKnown RBP eCLIP6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 PDIA4P13667 645 aaKnown RBP6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 TTC16Q8NEE8 873 aa6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 STAC3Q96MF2 364 aa6.71□□□□□ -1.33
SRGAP1-201ENST00000355086 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 TXNDC2Q86VQ3 553 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC196A0A1B0GTZ2 297 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 KIF2AO00139 706 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 LMAN1P49257 510 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 ZSCAN12O43309 604 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 TDRD12Q587J7 1177 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 KIF18AQ8NI77 898 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 PHAXQ9H814 394 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 PUF60Q9UHX1 559 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 RAPGEF2Q9Y4G8 1499 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 TMCO5BA8MYB1 307 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 ANKIB1Q9P2G1 1089 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC175P0C221 793 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 HLTFQ14527 1009 aaKnown RBP eCLIP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 LRRC45Q96CN5 670 aa6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 NUP88Q99567 741 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-201ENST00000355086 CA8P35219 290 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 ABCC8Q09428 1581 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 IQCA1Q86XH1 822 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PDCL2Q8N4E4 241 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PPP1R14CQ8TAE6 165 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 SREK1Q8WXA9 508 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 BCAR3O75815 825 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 NAPBQ9H115 298 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC83Q8IWF9 413 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 TSR2Q969E8 191 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 ANO10Q9NW15 660 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 CTCFLQ8NI51 663 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 CECR2Q9BXF3 1484 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PRAM1Q96QH2 718 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 ALS2CR12Q96Q35 445 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 SERPINA10Q9UK55 444 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 CAMK4Q16566 473 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 URI1O94763 535 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 ZWINTO95229 277 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 RANBP6O60518 1105 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PRDM2Q13029 1718 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PRPF4BQ13523 1007 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 NOP2P46087 812 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 ZNF444Q8N0Y2 327 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 PLCD3Q8N3E9 789 aa6.7□□□□□ -1.34
SRGAP1-201ENST00000355086 CHD1LQ86WJ1 897 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 OSCARQ8IYS5 282 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 NAA15Q9BXJ9 866 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 PDE3AQ14432 1141 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 PRDM11Q9NQV5 511 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 NLRP5P59047 1200 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 RAB3IL1Q8TBN0 382 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 AKAP2Q9Y2D5 859 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 ZNF354CQ86Y25 554 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 TTC21AQ8NDW8 1320 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 BAG4O95429 457 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 SLF2Q8IX21 1173 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 A0A087WZG4 1122 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 A0A1W2PRG0 241 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 MTIF2P46199 727 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 CATIPQ7Z7H3 387 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 C8orf76Q96K31 380 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 IKBKGQ9Y6K9 419 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 ACTN2P35609 894 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 C6orf163Q5TEZ5 329 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 SYCP3Q8IZU3 236 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 PRKCSHP14314 528 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 IL1RAPL2Q9NP60 686 aa6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 ARL1P40616 181 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-201ENST00000355086 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 PKNOX2Q96KN3 472 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 BBXQ8WY36 941 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 MAP3K9P80192 1104 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 SPECC1LQ69YQ0 1117 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms