RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 SPG7Q9UQ90 795 aa28.46■■■□□ 2.15
TNFRSF10B-202ENST00000347739 EIF4A1P60842 406 aaKnown RBP28.45■■■□□ 2.14
TNFRSF10B-202ENST00000347739 COL5A2P05997 1499 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF10B-202ENST00000347739 ROBO1Q9Y6N7 1651 aa28.44■■■□□ 2.14
TNFRSF10B-202ENST00000347739 WDR17Q8IZU2 1322 aa28.44■■■□□ 2.14
TNFRSF10B-202ENST00000347739 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
TNFRSF10B-202ENST00000347739 AHDC1Q5TGY3 1603 aaPredicted RBP28.43■■■□□ 2.14
TNFRSF10B-202ENST00000347739 PARP4Q9UKK3 1724 aaKnown RBP28.43■■■□□ 2.14
TNFRSF10B-202ENST00000347739 BTBD11A6QL63 1104 aa28.43■■■□□ 2.14
TNFRSF10B-202ENST00000347739 RGS3P49796 1198 aa28.43■■■□□ 2.14
TNFRSF10B-202ENST00000347739 SMC5Q8IY18 1101 aa28.41■■■□□ 2.14
TNFRSF10B-202ENST00000347739 PDZRN3Q9UPQ7 1066 aa28.4■■■□□ 2.14
TNFRSF10B-202ENST00000347739 N4BP2Q86UW6 1770 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF10B-202ENST00000347739 PHKG2P15735 406 aa28.4■■■□□ 2.14
TNFRSF10B-202ENST00000347739 KDM6AO15550 1401 aaPredicted RBP28.39■■■□□ 2.14
TNFRSF10B-202ENST00000347739 G2E3Q7L622 706 aa28.39■■■□□ 2.14
TNFRSF10B-202ENST00000347739 HDGFL1Q5TGJ6 251 aa28.38■■■□□ 2.13
TNFRSF10B-202ENST00000347739 IFNL2Q8IZJ0 200 aa28.38■■■□□ 2.13
TNFRSF10B-202ENST00000347739 HEG1Q9ULI3 1381 aa28.37■■■□□ 2.13
TNFRSF10B-202ENST00000347739 MRC1P22897 1456 aa28.37■■■□□ 2.13
TNFRSF10B-202ENST00000347739 COL22A1Q8NFW1 1626 aaPredicted RBP28.37■■■□□ 2.13
TNFRSF10B-202ENST00000347739 FLIIQ13045 1269 aa28.37■■■□□ 2.13
TNFRSF10B-202ENST00000347739 FAM161AQ3B820 660 aa28.36■■■□□ 2.13
TNFRSF10B-202ENST00000347739 PXDNLA1KZ92 1463 aa28.35■■■□□ 2.13
TNFRSF10B-202ENST00000347739 KCNQ3O43525 872 aa28.35■■■□□ 2.13
TNFRSF10B-202ENST00000347739 CCT4P50991 539 aaKnown RBP28.35■■■□□ 2.13
TNFRSF10B-202ENST00000347739 HSP90AB1P08238 724 aaKnown RBP28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 CARD10Q9BWT7 1032 aa28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 SLC52A2Q9HAB3 445 aa28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 C8orf34Q49A92 452 aa28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 TOM1L2Q6ZVM7 507 aa28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 DCAF5Q96JK2 942 aa28.32■■■□□ 2.12
TNFRSF10B-202ENST00000347739 CYP27B1O15528 508 aa28.31■■■□□ 2.12
TNFRSF10B-202ENST00000347739 NECTIN2Q92692 538 aa28.31■■■□□ 2.12
TNFRSF10B-202ENST00000347739 GCC1Q96CN9 775 aa28.31■■■□□ 2.12
TNFRSF10B-202ENST00000347739 C1orf115Q9H7X2 142 aa28.31■■■□□ 2.12
TNFRSF10B-202ENST00000347739 FKBP5Q13451 457 aaPredicted RBP28.3■■■□□ 2.12
TNFRSF10B-202ENST00000347739 ATP10DQ9P241 1426 aa28.3■■■□□ 2.12
TNFRSF10B-202ENST00000347739 SIRT2Q8IXJ6 389 aa28.29■■■□□ 2.12
TNFRSF10B-202ENST00000347739 COL14A1Q05707 1796 aaKnown RBP28.29■■■□□ 2.12
TNFRSF10B-202ENST00000347739 F6X3S4 739 aa28.28■■■□□ 2.12
TNFRSF10B-202ENST00000347739 GIGYF1O75420 1035 aaPredicted RBP28.28■■■□□ 2.12
TNFRSF10B-202ENST00000347739 NUCB1Q02818 461 aa28.28■■■□□ 2.12
TNFRSF10B-202ENST00000347739 PCDH11XQ9BZA7 1347 aa28.26■■■□□ 2.11
TNFRSF10B-202ENST00000347739 PCDH11YQ9BZA8 1340 aa28.26■■■□□ 2.11
TNFRSF10B-202ENST00000347739 SLC4A10Q6U841 1118 aa28.26■■■□□ 2.11
TNFRSF10B-202ENST00000347739 RPAP2Q8IXW5 612 aaPredicted RBP28.26■■■□□ 2.11
TNFRSF10B-202ENST00000347739 SHANK3Q9BYB0 1731 aa28.25■■■□□ 2.11
TNFRSF10B-202ENST00000347739 EIF2S2P20042 333 aaKnown RBP28.25■■■□□ 2.11
TNFRSF10B-202ENST00000347739 ZNF790Q6PG37 636 aa28.25■■■□□ 2.11
TNFRSF10B-202ENST00000347739 ANKRD44Q8N8A2 993 aa28.25■■■□□ 2.11
TNFRSF10B-202ENST00000347739 MEIS3Q99687 375 aa28.25■■■□□ 2.11
TNFRSF10B-202ENST00000347739 CHPF2Q9P2E5 772 aa28.24■■■□□ 2.11
TNFRSF10B-202ENST00000347739 IL2RBP14784 551 aa28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 ZCRB1Q8TBF4 217 aaKnown RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 DBF4Q9UBU7 674 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 ANP32AP39687 249 aaKnown RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 PHAXQ9H814 394 aaKnown RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 COL16A1Q07092 1604 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF10B-202ENST00000347739 EVA1CP58658 441 aa28.22■■■□□ 2.11
TNFRSF10B-202ENST00000347739 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
TNFRSF10B-202ENST00000347739 CEP85Q6P2H3 762 aa28.21■■■□□ 2.11
TNFRSF10B-202ENST00000347739 PHLPP1O60346 1717 aa28.21■■■□□ 2.11
TNFRSF10B-202ENST00000347739 C5P01031 1676 aa28.21■■■□□ 2.11
TNFRSF10B-202ENST00000347739 CHD1LQ86WJ1 897 aa28.21■■■□□ 2.11
TNFRSF10B-202ENST00000347739 STRN4Q9NRL3 753 aa28.21■■■□□ 2.11
TNFRSF10B-202ENST00000347739 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
TNFRSF10B-202ENST00000347739 GNAI3P08754 354 aa28.18■■■□□ 2.1
TNFRSF10B-202ENST00000347739 DCTPP1Q9H773 170 aa28.18■■■□□ 2.1
TNFRSF10B-202ENST00000347739 BTG4Q9NY30 223 aa28.17■■■□□ 2.1
TNFRSF10B-202ENST00000347739 SLC39A6Q13433 755 aa28.16■■■□□ 2.1
TNFRSF10B-202ENST00000347739 PLCH1Q4KWH8 1693 aa28.16■■■□□ 2.1
TNFRSF10B-202ENST00000347739 CABP4P57796 275 aa28.15■■■□□ 2.1
TNFRSF10B-202ENST00000347739 GNAI2P04899 355 aa28.15■■■□□ 2.1
TNFRSF10B-202ENST00000347739 GLI3P10071 1580 aa28.15■■■□□ 2.1
TNFRSF10B-202ENST00000347739 HYPKQ9NX55 129 aa28.15■■■□□ 2.1
TNFRSF10B-202ENST00000347739 PRAMEF22A3QJZ6 481 aa28.14■■■□□ 2.1
TNFRSF10B-202ENST00000347739 ERVV-2B6SEH9 535 aa28.14■■■□□ 2.1
TNFRSF10B-202ENST00000347739 ANKRD45Q5TZF3 282 aa28.14■■■□□ 2.1
TNFRSF10B-202ENST00000347739 LNPKQ9C0E8 428 aa28.14■■■□□ 2.1
TNFRSF10B-202ENST00000347739 PAPPAQ13219 1627 aa28.14■■■□□ 2.1
TNFRSF10B-202ENST00000347739 TTC5Q8N0Z6 440 aa28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 DNAAF4Q8WXU2 420 aa28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 DDX21Q9NR30 783 aaKnown RBP eCLIP28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 LAMB4A4D0S4 1761 aa28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 UBR2Q8IWV8 1755 aa28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 ADCY9O60503 1353 aa28.13■■■□□ 2.09
TNFRSF10B-202ENST00000347739 HMMRO75330 724 aa28.12■■■□□ 2.09
TNFRSF10B-202ENST00000347739 ZNF496Q96IT1 587 aaPredicted RBP28.12■■■□□ 2.09
TNFRSF10B-202ENST00000347739 SRCIN1Q9C0H9 1055 aa28.12■■■□□ 2.09
TNFRSF10B-202ENST00000347739 PI4KAP2A4QPH2 592 aa28.11■■■□□ 2.09
TNFRSF10B-202ENST00000347739 PI4KAP1Q8N8J0 262 aa28.11■■■□□ 2.09
TNFRSF10B-202ENST00000347739 FMNL2Q96PY5 1086 aa28.11■■■□□ 2.09
TNFRSF10B-202ENST00000347739 DISP2A7MBM2 1401 aa28.11■■■□□ 2.09
TNFRSF10B-202ENST00000347739 ANXA1P04083 346 aa28.1■■■□□ 2.09
TNFRSF10B-202ENST00000347739 USP44Q9H0E7 712 aa28.1■■■□□ 2.09
TNFRSF10B-202ENST00000347739 MSH5O43196 834 aa28.09■■■□□ 2.09
TNFRSF10B-202ENST00000347739 SNRPA1P09661 255 aaKnown RBP28.09■■■□□ 2.09
TNFRSF10B-202ENST00000347739 PROSER3Q2NL68 480 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms