RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
SMG7-201ENST00000347615 CABP4P57796 275 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 FAM193AP78312 1265 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 FLIIQ13045 1269 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 FOXO3O43524 673 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 HSP90AA4PQ58FG1 418 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
SMG7-201ENST00000347615 FAM135AQ9P2D6 1515 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 CPA1P15085 419 aa12.38□□□□□ -0.43
SMG7-201ENST00000347615 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
SMG7-201ENST00000347615 ATF3P18847 181 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 CCDC158Q5M9N0 1113 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 HIP1O00291 1037 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 PPP1R42Q7Z4L9 355 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 MTERF4Q7Z6M4 381 aaKnown RBP12.37□□□□□ -0.43
SMG7-201ENST00000347615 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
SMG7-201ENST00000347615 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
SMG7-201ENST00000347615 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 HAND2P61296 217 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 HSP90B2PQ58FF3 399 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMG7-201ENST00000347615 V9GYY5 206 aaPredicted RBP12.36□□□□□ -0.43
SMG7-201ENST00000347615 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 STX6O43752 255 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
SMG7-201ENST00000347615 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
SMG7-201ENST00000347615 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 ASXL1Q8IXJ9 1541 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
SMG7-201ENST00000347615 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
SMG7-201ENST00000347615 ANKRD1Q15327 319 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
SMG7-201ENST00000347615 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
SMG7-201ENST00000347615 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
SMG7-201ENST00000347615 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
SMG7-201ENST00000347615 TNNT1P13805 278 aa12.34□□□□□ -0.43
SMG7-201ENST00000347615 RUFY1Q96T51 708 aa12.34□□□□□ -0.43
SMG7-201ENST00000347615 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
SMG7-201ENST00000347615 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
SMG7-201ENST00000347615 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
SMG7-201ENST00000347615 MAP3K2Q9Y2U5 619 aa12.34□□□□□ -0.43
SMG7-201ENST00000347615 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
SMG7-201ENST00000347615 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
SMG7-201ENST00000347615 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.43
SMG7-201ENST00000347615 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.43
SMG7-201ENST00000347615 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.43
SMG7-201ENST00000347615 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.43
SMG7-201ENST00000347615 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
SMG7-201ENST00000347615 CLCN1P35523 988 aa12.33□□□□□ -0.44
SMG7-201ENST00000347615 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
SMG7-201ENST00000347615 CCDC69A6NI79 296 aa12.33□□□□□ -0.44
SMG7-201ENST00000347615 WASLO00401 505 aaPredicted RBP12.33□□□□□ -0.44
SMG7-201ENST00000347615 PDE1AP54750 535 aa12.33□□□□□ -0.44
SMG7-201ENST00000347615 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
SMG7-201ENST00000347615 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
SMG7-201ENST00000347615 LRSAM1Q6UWE0 723 aa12.33□□□□□ -0.44
SMG7-201ENST00000347615 CEP57L1Q8IYX8 460 aa12.33□□□□□ -0.44
SMG7-201ENST00000347615 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
SMG7-201ENST00000347615 KIF6Q6ZMV9 814 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 RPGRIP1LQ68CZ1 1315 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 AMOTL1Q8IY63 956 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
SMG7-201ENST00000347615 CHST3Q7LGC8 479 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 ZBTB40Q9NUA8 1239 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 ADGRL1O94910 1474 aa12.32□□□□□ -0.44
SMG7-201ENST00000347615 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
SMG7-201ENST00000347615 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
SMG7-201ENST00000347615 SART3Q15020 963 aaKnown RBP12.31□□□□□ -0.44
SMG7-201ENST00000347615 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
SMG7-201ENST00000347615 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
SMG7-201ENST00000347615 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
SMG7-201ENST00000347615 GOLIM4O00461 696 aa12.31□□□□□ -0.44
SMG7-201ENST00000347615 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
SMG7-201ENST00000347615 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms