RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
CSHL1-203ENST00000346606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
CSHL1-203ENST00000346606 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
CSHL1-203ENST00000346606 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
CSHL1-203ENST00000346606 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
CSHL1-203ENST00000346606 APLP1P51693 650 aa20.25■□□□□ 0.83
CSHL1-203ENST00000346606 TGFB2P61812 414 aa20.25■□□□□ 0.83
CSHL1-203ENST00000346606 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
CSHL1-203ENST00000346606 KDRP35968 1356 aa20.24■□□□□ 0.83
CSHL1-203ENST00000346606 TOMM70O94826 608 aa20.24■□□□□ 0.83
CSHL1-203ENST00000346606 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
CSHL1-203ENST00000346606 NMRK2Q9NPI5 230 aa20.24■□□□□ 0.83
CSHL1-203ENST00000346606 DPEP1P16444 411 aa20.23■□□□□ 0.83
CSHL1-203ENST00000346606 C10orf71Q711Q0 1435 aa20.23■□□□□ 0.83
CSHL1-203ENST00000346606 NLGN1Q8N2Q7 840 aa20.23■□□□□ 0.83
CSHL1-203ENST00000346606 ARHGEF1Q92888 912 aaKnown RBP20.23■□□□□ 0.83
CSHL1-203ENST00000346606 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
CSHL1-203ENST00000346606 CDCA8Q53HL2 280 aa20.22■□□□□ 0.83
CSHL1-203ENST00000346606 ARHGAP27Q6ZUM4 889 aa20.22■□□□□ 0.83
CSHL1-203ENST00000346606 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
CSHL1-203ENST00000346606 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
CSHL1-203ENST00000346606 GYS1P13807 737 aa20.21■□□□□ 0.83
CSHL1-203ENST00000346606 KCNA3P22001 575 aa20.21■□□□□ 0.83
CSHL1-203ENST00000346606 KIF20BQ96Q89 1820 aa20.2■□□□□ 0.82
CSHL1-203ENST00000346606 EIF4A2Q14240 407 aaKnown RBP20.2■□□□□ 0.82
CSHL1-203ENST00000346606 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
CSHL1-203ENST00000346606 FCHSD2O94868 740 aa20.18■□□□□ 0.82
CSHL1-203ENST00000346606 RBM42Q9BTD8 480 aaKnown RBP20.18■□□□□ 0.82
CSHL1-203ENST00000346606 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 RPS6KA4O75676 772 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 ADRA2BP18089 450 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 HTRA3P83110 453 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 CNTNAP4Q9C0A0 1308 aa20.17■□□□□ 0.82
CSHL1-203ENST00000346606 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
CSHL1-203ENST00000346606 C9orf131Q5VYM1 1079 aa20.16■□□□□ 0.82
CSHL1-203ENST00000346606 ANKRD26Q9UPS8 1709 aa20.16■□□□□ 0.82
CSHL1-203ENST00000346606 RFC4P35249 363 aa20.15■□□□□ 0.82
CSHL1-203ENST00000346606 PARP3Q9Y6F1 533 aa20.15■□□□□ 0.82
CSHL1-203ENST00000346606 N4BP2Q86UW6 1770 aaPredicted RBP20.15■□□□□ 0.82
CSHL1-203ENST00000346606 TNNT2P45379 298 aaPredicted RBP20.14■□□□□ 0.81
CSHL1-203ENST00000346606 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
CSHL1-203ENST00000346606 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
CSHL1-203ENST00000346606 DCAF5Q96JK2 942 aa20.13■□□□□ 0.81
CSHL1-203ENST00000346606 DDR1Q08345 913 aa20.12■□□□□ 0.81
CSHL1-203ENST00000346606 FKBP8Q14318 412 aa20.12■□□□□ 0.81
CSHL1-203ENST00000346606 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
CSHL1-203ENST00000346606 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
CSHL1-203ENST00000346606 C4AP0C0L4 1744 aa20.11■□□□□ 0.81
CSHL1-203ENST00000346606 PIM2Q9P1W9 311 aa20.11■□□□□ 0.81
CSHL1-203ENST00000346606 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
CSHL1-203ENST00000346606 CABP4P57796 275 aa20.1■□□□□ 0.81
CSHL1-203ENST00000346606 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
CSHL1-203ENST00000346606 PTCD1O75127 700 aaKnown RBP20.09■□□□□ 0.81
CSHL1-203ENST00000346606 CHRNA5P30532 468 aa20.09■□□□□ 0.81
CSHL1-203ENST00000346606 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
CSHL1-203ENST00000346606 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
CSHL1-203ENST00000346606 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
CSHL1-203ENST00000346606 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
CSHL1-203ENST00000346606 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.81
CSHL1-203ENST00000346606 DALRD3Q5D0E6 543 aaKnown RBP20.08■□□□□ 0.81
CSHL1-203ENST00000346606 ZNF530Q6P9A1 599 aaPredicted RBP20.08■□□□□ 0.81
CSHL1-203ENST00000346606 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.81
CSHL1-203ENST00000346606 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
CSHL1-203ENST00000346606 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 FSTL1Q12841 308 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 RNF181Q9P0P0 153 aa20.07■□□□□ 0.8
CSHL1-203ENST00000346606 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
CSHL1-203ENST00000346606 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
CSHL1-203ENST00000346606 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
CSHL1-203ENST00000346606 PCNTO95613 3336 aa20.05■□□□□ 0.8
CSHL1-203ENST00000346606 MTHFSP49914 203 aa20.05■□□□□ 0.8
CSHL1-203ENST00000346606 INTS5Q6P9B9 1019 aaKnown RBP20.05■□□□□ 0.8
CSHL1-203ENST00000346606 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
CSHL1-203ENST00000346606 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
CSHL1-203ENST00000346606 KDM2BQ8NHM5 1336 aa20.04■□□□□ 0.8
CSHL1-203ENST00000346606 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
CSHL1-203ENST00000346606 TM4SF1P30408 202 aa20.04■□□□□ 0.8
CSHL1-203ENST00000346606 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
CSHL1-203ENST00000346606 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
CSHL1-203ENST00000346606 PRELPP51888 382 aa20.02■□□□□ 0.8
CSHL1-203ENST00000346606 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
CSHL1-203ENST00000346606 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
CSHL1-203ENST00000346606 RASSF7Q02833 373 aa20■□□□□ 0.79
CSHL1-203ENST00000346606 C1orf141Q5JVX7 400 aa19.99■□□□□ 0.79
CSHL1-203ENST00000346606 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
CSHL1-203ENST00000346606 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
CSHL1-203ENST00000346606 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
CSHL1-203ENST00000346606 PANK3Q9H999 370 aa19.98■□□□□ 0.79
CSHL1-203ENST00000346606 NFIXQ14938 502 aa19.97■□□□□ 0.79
CSHL1-203ENST00000346606 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
CSHL1-203ENST00000346606 SMC1BQ8NDV3 1235 aa19.97■□□□□ 0.79
CSHL1-203ENST00000346606 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
CSHL1-203ENST00000346606 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
CSHL1-203ENST00000346606 CAPN15O75808 1086 aa19.96■□□□□ 0.79
CSHL1-203ENST00000346606 BCL2L12Q9HB09 334 aa19.96■□□□□ 0.79
CSHL1-203ENST00000346606 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms