RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 SYT17Q9BSW7 474 aa21.27■□□□□ 0.99
SNRPN-201ENST00000346403 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
SNRPN-201ENST00000346403 C4BP0C0L5 1744 aa21.25■□□□□ 0.99
SNRPN-201ENST00000346403 LINC00116Q8NCU8 138 aa21.25■□□□□ 0.99
SNRPN-201ENST00000346403 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
SNRPN-201ENST00000346403 COL3A1P02461 1466 aaPredicted RBP21.24■□□□□ 0.99
SNRPN-201ENST00000346403 TAF1LQ8IZX4 1826 aa21.24■□□□□ 0.99
SNRPN-201ENST00000346403 ITPK1Q13572 414 aa21.24■□□□□ 0.99
SNRPN-201ENST00000346403 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
SNRPN-201ENST00000346403 MAP3K5Q99683 1374 aa21.24■□□□□ 0.99
SNRPN-201ENST00000346403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
SNRPN-201ENST00000346403 PHF14O94880 888 aa21.22■□□□□ 0.99
SNRPN-201ENST00000346403 SSFA2P28290 1259 aa21.22■□□□□ 0.99
SNRPN-201ENST00000346403 GNPATO15228 680 aa21.21■□□□□ 0.99
SNRPN-201ENST00000346403 PPP2R1AP30153 589 aa21.21■□□□□ 0.99
SNRPN-201ENST00000346403 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
SNRPN-201ENST00000346403 KLHL34Q8N239 644 aa21.21■□□□□ 0.99
SNRPN-201ENST00000346403 NUDCQ9Y266 331 aa21.21■□□□□ 0.99
SNRPN-201ENST00000346403 MSL1Q68DK7 614 aa21.2■□□□□ 0.98
SNRPN-201ENST00000346403 SLC52A2Q9HAB3 445 aa21.19■□□□□ 0.98
SNRPN-201ENST00000346403 COL24A1Q17RW2 1714 aa21.19■□□□□ 0.98
SNRPN-201ENST00000346403 RNMTO43148 476 aaKnown RBP21.18■□□□□ 0.98
SNRPN-201ENST00000346403 PTCD1O75127 700 aaKnown RBP21.18■□□□□ 0.98
SNRPN-201ENST00000346403 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
SNRPN-201ENST00000346403 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
SNRPN-201ENST00000346403 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
SNRPN-201ENST00000346403 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
SNRPN-201ENST00000346403 RTCBQ9Y3I0 505 aaKnown RBP21.17■□□□□ 0.98
SNRPN-201ENST00000346403 ZNF831Q5JPB2 1677 aa21.16■□□□□ 0.98
SNRPN-201ENST00000346403 RC3H1Q5TC82 1133 aaKnown RBP21.16■□□□□ 0.98
SNRPN-201ENST00000346403 CNTNAP4Q9C0A0 1308 aa21.16■□□□□ 0.98
SNRPN-201ENST00000346403 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
SNRPN-201ENST00000346403 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
SNRPN-201ENST00000346403 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
SNRPN-201ENST00000346403 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
SNRPN-201ENST00000346403 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNRPN-201ENST00000346403 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
SNRPN-201ENST00000346403 MRC1P22897 1456 aa21.14■□□□□ 0.97
SNRPN-201ENST00000346403 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
SNRPN-201ENST00000346403 ADRA2BP18089 450 aa21.13■□□□□ 0.97
SNRPN-201ENST00000346403 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
SNRPN-201ENST00000346403 YY1P25490 414 aa21.12■□□□□ 0.97
SNRPN-201ENST00000346403 RPS6KA4O75676 772 aa21.11■□□□□ 0.97
SNRPN-201ENST00000346403 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
SNRPN-201ENST00000346403 FCHSD2O94868 740 aa21.1■□□□□ 0.97
SNRPN-201ENST00000346403 TEFQ10587 303 aa21.1■□□□□ 0.97
SNRPN-201ENST00000346403 GPR162Q16538 588 aa21.1■□□□□ 0.97
SNRPN-201ENST00000346403 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
SNRPN-201ENST00000346403 CD2APQ9Y5K6 639 aa21.09■□□□□ 0.97
SNRPN-201ENST00000346403 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
SNRPN-201ENST00000346403 RFC4P35249 363 aa21.08■□□□□ 0.97
SNRPN-201ENST00000346403 SLC39A6Q13433 755 aa21.08■□□□□ 0.97
SNRPN-201ENST00000346403 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
SNRPN-201ENST00000346403 ARHGEF1Q92888 912 aaKnown RBP21.08■□□□□ 0.97
SNRPN-201ENST00000346403 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.97
SNRPN-201ENST00000346403 COL5A3P25940 1745 aaPredicted RBP21.08■□□□□ 0.97
SNRPN-201ENST00000346403 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
SNRPN-201ENST00000346403 NLGN1Q8N2Q7 840 aa21.07■□□□□ 0.96
SNRPN-201ENST00000346403 IL17REQ8NFR9 667 aa21.07■□□□□ 0.96
SNRPN-201ENST00000346403 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
SNRPN-201ENST00000346403 DNAJC10Q8IXB1 793 aa21.05■□□□□ 0.96
SNRPN-201ENST00000346403 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
SNRPN-201ENST00000346403 CICQ96RK0 1608 aaPredicted RBP21.05■□□□□ 0.96
SNRPN-201ENST00000346403 NEFMP07197 916 aa21.04■□□□□ 0.96
SNRPN-201ENST00000346403 MMP10P09238 476 aa21.04■□□□□ 0.96
SNRPN-201ENST00000346403 RTF1Q92541 710 aaKnown RBP21.04■□□□□ 0.96
SNRPN-201ENST00000346403 CCDC87Q9NVE4 849 aa21.04■□□□□ 0.96
SNRPN-201ENST00000346403 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
SNRPN-201ENST00000346403 RALBP1Q15311 655 aa21.04■□□□□ 0.96
SNRPN-201ENST00000346403 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
SNRPN-201ENST00000346403 TJP1Q07157 1748 aa21.03■□□□□ 0.96
SNRPN-201ENST00000346403 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
SNRPN-201ENST00000346403 CEMIPQ8WUJ3 1361 aa21.02■□□□□ 0.96
SNRPN-201ENST00000346403 CYP19A1P11511 503 aaPredicted RBP21.02■□□□□ 0.95
SNRPN-201ENST00000346403 GYS1P13807 737 aa21.02■□□□□ 0.95
SNRPN-201ENST00000346403 ZNF790Q6PG37 636 aa21.02■□□□□ 0.95
SNRPN-201ENST00000346403 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
SNRPN-201ENST00000346403 MYH14Q7Z406 1995 aaKnown RBP21■□□□□ 0.95
SNRPN-201ENST00000346403 GRIN3BO60391 1043 aa21■□□□□ 0.95
SNRPN-201ENST00000346403 STARD3NLO95772 234 aa21■□□□□ 0.95
SNRPN-201ENST00000346403 USP42Q9H9J4 1324 aaKnown RBP20.99■□□□□ 0.95
SNRPN-201ENST00000346403 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
SNRPN-201ENST00000346403 HTATSF1O43719 755 aaKnown RBP20.99■□□□□ 0.95
SNRPN-201ENST00000346403 ZNF496Q96IT1 587 aaPredicted RBP20.99■□□□□ 0.95
SNRPN-201ENST00000346403 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
SNRPN-201ENST00000346403 PNNQ9H307 717 aaKnown RBP20.99■□□□□ 0.95
SNRPN-201ENST00000346403 PARP3Q9Y6F1 533 aa20.99■□□□□ 0.95
SNRPN-201ENST00000346403 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
SNRPN-201ENST00000346403 ZPR1O75312 459 aa20.98■□□□□ 0.95
SNRPN-201ENST00000346403 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
SNRPN-201ENST00000346403 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
SNRPN-201ENST00000346403 MCM10Q7L590 875 aa20.97■□□□□ 0.95
SNRPN-201ENST00000346403 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
SNRPN-201ENST00000346403 YBX3P16989 372 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNRPN-201ENST00000346403 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
SNRPN-201ENST00000346403 ZBTB1Q9Y2K1 713 aa20.96■□□□□ 0.95
SNRPN-201ENST00000346403 UBR2Q8IWV8 1755 aa20.96■□□□□ 0.95
SNRPN-201ENST00000346403 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
SNRPN-201ENST00000346403 COL15A1P39059 1388 aa20.94■□□□□ 0.94
SNRPN-201ENST00000346403 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms