RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 KRT32Q14532 448 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 MCM6Q14566 821 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 TRIM27P14373 513 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 AMOTL1Q8IY63 956 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 MYRIPQ8NFW9 859 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 GOLGA6L9A6NEM1 432 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 USP48Q86UV5 1035 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 DDX54Q8TDD1 881 aaKnown RBP14.12□□□□□ -0.15
COL12A1-202ENST00000345356 DNAI1Q9UI46 699 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 MAP3K1Q13233 1512 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 FAM200AQ8TCP9 573 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 GBP2P32456 591 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 TMPOP42166 694 aaKnown RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 TMX3Q96JJ7 454 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 CAVIN2O95810 425 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 GJB2P29033 226 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 EIF5P55010 431 aaKnown RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-202ENST00000345356 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
COL12A1-202ENST00000345356 LIG1P18858 919 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 GABPB1Q06547 395 aaPredicted RBP14.1□□□□□ -0.15
COL12A1-202ENST00000345356 SEPT7Q16181 437 aaKnown RBP14.1□□□□□ -0.15
COL12A1-202ENST00000345356 GTF3C6Q969F1 213 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 ANO6Q4KMQ2 910 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 AACSQ86V21 672 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
COL12A1-202ENST00000345356 PTGS1P23219 599 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 TANGO6Q9C0B7 1094 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 CNPY2Q9Y2B0 182 aa14.1□□□□□ -0.15
COL12A1-202ENST00000345356 RAD21O60216 631 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
COL12A1-202ENST00000345356 CPLX3Q8WVH0 158 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 TAF4BQ92750 862 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 TRIM22Q8IYM9 498 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 FSIP1Q8NA03 581 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 SIL1Q9H173 461 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 IMMTQ16891 758 aaKnown RBP14.09□□□□□ -0.15
COL12A1-202ENST00000345356 BIN1O00499 593 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 NAIPQ13075 1403 aa14.09□□□□□ -0.15
COL12A1-202ENST00000345356 TDO2P48775 406 aa14.08□□□□□ -0.15
COL12A1-202ENST00000345356 ALDH1L2Q3SY69 923 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 CCDC91Q7Z6B0 441 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 ZSCAN22P10073 491 aaPredicted RBP14.08□□□□□ -0.16
COL12A1-202ENST00000345356 GOLGA6L10A0A0M3HER8 536 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
COL12A1-202ENST00000345356 RAB11FIP3O75154 756 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 A0A1B0GUL7 405 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 LUZP1Q86V48 1076 aa14.08□□□□□ -0.16
COL12A1-202ENST00000345356 KLHL10Q6JEL2 608 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 CDK5RAP3Q96JB5 506 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 SLC26A8Q96RN1 970 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 BCCIPQ9P287 314 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL12A1-202ENST00000345356 VPS18Q9P253 973 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 GPRASP1Q5JY77 1395 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 ANKRD62A6NC57 917 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 SPA17Q15506 151 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 PAXIP1Q6ZW49 1069 aaPredicted RBP14.07□□□□□ -0.16
COL12A1-202ENST00000345356 FYB1O15117 783 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 CCDC113Q9H0I3 377 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 NUCB1Q02818 461 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
COL12A1-202ENST00000345356 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
COL12A1-202ENST00000345356 CDKL5O76039 1030 aa14.06□□□□□ -0.16
COL12A1-202ENST00000345356 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
COL12A1-202ENST00000345356 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
COL12A1-202ENST00000345356 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
COL12A1-202ENST00000345356 SLC3A2P08195 630 aaKnown RBP14.06□□□□□ -0.16
COL12A1-202ENST00000345356 SRRTQ9BXP5 876 aaKnown RBP14.06□□□□□ -0.16
COL12A1-202ENST00000345356 TTC22Q5TAA0 569 aa14.06□□□□□ -0.16
COL12A1-202ENST00000345356 GUCY1B3Q02153 619 aa14.06□□□□□ -0.16
COL12A1-202ENST00000345356 ANKRD30BQ9BXX2 1392 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 MTMR7Q9Y216 660 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 CCDC175P0C221 793 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 PAFAH1B1P43034 410 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 IFFO1Q0D2I5 559 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 TBC1D2BQ9UPU7 963 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL12A1-202ENST00000345356 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
COL12A1-202ENST00000345356 ATP2C2O75185 946 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-202ENST00000345356 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-202ENST00000345356 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-202ENST00000345356 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 HSPA4P34932 840 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 DNAJC25Q9H1X3 360 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 EBAG9O00559 213 aa14.04□□□□□ -0.16
COL12A1-202ENST00000345356 CEP57Q86XR8 500 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms