RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CYP27B1O15528 508 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 MPRIPQ6WCQ1 1025 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 ZBED9Q6R2W3 1325 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 NCAPD2Q15021 1401 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 HSPA6P17066 643 aa17.99■□□□□ 0.47
HERPUD1-202ENST00000344114 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
HERPUD1-202ENST00000344114 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-202ENST00000344114 AK7Q96M32 723 aa17.98■□□□□ 0.47
HERPUD1-202ENST00000344114 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
HERPUD1-202ENST00000344114 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
HERPUD1-202ENST00000344114 PPP2R1AP30153 589 aa17.97■□□□□ 0.47
HERPUD1-202ENST00000344114 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
HERPUD1-202ENST00000344114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-202ENST00000344114 SSFA2P28290 1259 aa17.95■□□□□ 0.46
HERPUD1-202ENST00000344114 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
HERPUD1-202ENST00000344114 PIGBQ92521 554 aa17.95■□□□□ 0.46
HERPUD1-202ENST00000344114 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
HERPUD1-202ENST00000344114 ZNF526Q8TF50 670 aaPredicted RBP17.94■□□□□ 0.46
HERPUD1-202ENST00000344114 PHF14O94880 888 aa17.93■□□□□ 0.46
HERPUD1-202ENST00000344114 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
HERPUD1-202ENST00000344114 KIF3CO14782 793 aa17.92■□□□□ 0.46
HERPUD1-202ENST00000344114 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
HERPUD1-202ENST00000344114 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
HERPUD1-202ENST00000344114 SIK1P57059 783 aa17.91■□□□□ 0.46
HERPUD1-202ENST00000344114 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
HERPUD1-202ENST00000344114 ZNF831Q5JPB2 1677 aa17.91■□□□□ 0.46
HERPUD1-202ENST00000344114 EMILIN1Q9Y6C2 1016 aa17.91■□□□□ 0.46
HERPUD1-202ENST00000344114 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
HERPUD1-202ENST00000344114 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 ITPK1Q13572 414 aa17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 SPG7Q9UQ90 795 aa17.89■□□□□ 0.45
HERPUD1-202ENST00000344114 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
HERPUD1-202ENST00000344114 GNPATO15228 680 aa17.87■□□□□ 0.45
HERPUD1-202ENST00000344114 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
HERPUD1-202ENST00000344114 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
HERPUD1-202ENST00000344114 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
HERPUD1-202ENST00000344114 KDRP35968 1356 aa17.86■□□□□ 0.45
HERPUD1-202ENST00000344114 PLEKHG2Q9H7P9 1386 aa17.85■□□□□ 0.45
HERPUD1-202ENST00000344114 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
HERPUD1-202ENST00000344114 EYA1Q99502 592 aa17.85■□□□□ 0.45
HERPUD1-202ENST00000344114 C4AP0C0L4 1744 aa17.85■□□□□ 0.45
HERPUD1-202ENST00000344114 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
HERPUD1-202ENST00000344114 MMP10P09238 476 aa17.84■□□□□ 0.45
HERPUD1-202ENST00000344114 PHKG2P15735 406 aa17.84■□□□□ 0.45
HERPUD1-202ENST00000344114 TGFB2P61812 414 aa17.84■□□□□ 0.45
HERPUD1-202ENST00000344114 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
HERPUD1-202ENST00000344114 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.45
HERPUD1-202ENST00000344114 APLP1P51693 650 aa17.83■□□□□ 0.45
HERPUD1-202ENST00000344114 ATG3Q9NT62 314 aa17.83■□□□□ 0.45
HERPUD1-202ENST00000344114 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
HERPUD1-202ENST00000344114 TOMM70O94826 608 aa17.81■□□□□ 0.44
HERPUD1-202ENST00000344114 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-202ENST00000344114 NLGN1Q8N2Q7 840 aa17.8■□□□□ 0.44
HERPUD1-202ENST00000344114 RTCBQ9Y3I0 505 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-202ENST00000344114 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-202ENST00000344114 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 DNAJC5GQ8N7S2 189 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 BCS1LQ9Y276 419 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 COL3A1P02461 1466 aaPredicted RBP17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 A0A0G2JLW4 131 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 ADRA2BP18089 450 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 CFAP53Q96M91 514 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
HERPUD1-202ENST00000344114 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
HERPUD1-202ENST00000344114 GYS1P13807 737 aa17.78■□□□□ 0.44
HERPUD1-202ENST00000344114 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-202ENST00000344114 CCDC87Q9NVE4 849 aa17.78■□□□□ 0.44
HERPUD1-202ENST00000344114 ADAMTS8Q9UP79 889 aa17.78■□□□□ 0.44
HERPUD1-202ENST00000344114 ERVV-2B6SEH9 535 aa17.77■□□□□ 0.43
HERPUD1-202ENST00000344114 DPEP1P16444 411 aa17.76■□□□□ 0.43
HERPUD1-202ENST00000344114 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-202ENST00000344114 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
HERPUD1-202ENST00000344114 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
HERPUD1-202ENST00000344114 KCNA3P22001 575 aa17.75■□□□□ 0.43
HERPUD1-202ENST00000344114 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
HERPUD1-202ENST00000344114 FCHSD2O94868 740 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 MTHFSP49914 203 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 NUDCQ9Y266 331 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 KDM6AO15550 1401 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 TJP1Q07157 1748 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 SBF1O95248 1867 aa17.74■□□□□ 0.43
HERPUD1-202ENST00000344114 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 NEFLP07196 543 aa17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 RFC4P35249 363 aa17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
HERPUD1-202ENST00000344114 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-202ENST00000344114 C9orf131Q5VYM1 1079 aa17.71■□□□□ 0.43
HERPUD1-202ENST00000344114 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
HERPUD1-202ENST00000344114 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms