RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 ERVV-2B6SEH9 535 aa17.77■□□□□ 0.43
MS4A4A-202ENST00000343968 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.43
MS4A4A-202ENST00000343968 MEX3CQ5U5Q3 659 aaKnown RBP17.77■□□□□ 0.43
MS4A4A-202ENST00000343968 TSPYL6Q8N831 410 aa17.77■□□□□ 0.43
MS4A4A-202ENST00000343968 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.43
MS4A4A-202ENST00000343968 EXOC5O00471 708 aa17.76■□□□□ 0.43
MS4A4A-202ENST00000343968 BCAR3O75815 825 aa17.76■□□□□ 0.43
MS4A4A-202ENST00000343968 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
MS4A4A-202ENST00000343968 BTBD11A6QL63 1104 aa17.75■□□□□ 0.43
MS4A4A-202ENST00000343968 ATRNO75882 1429 aa17.75■□□□□ 0.43
MS4A4A-202ENST00000343968 AFF2P51816 1311 aa17.75■□□□□ 0.43
MS4A4A-202ENST00000343968 FBXO41Q8TF61 875 aa17.74■□□□□ 0.43
MS4A4A-202ENST00000343968 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
MS4A4A-202ENST00000343968 HOXB7P09629 217 aa17.74■□□□□ 0.43
MS4A4A-202ENST00000343968 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
MS4A4A-202ENST00000343968 EIF4A1P60842 406 aaKnown RBP17.73■□□□□ 0.43
MS4A4A-202ENST00000343968 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
MS4A4A-202ENST00000343968 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
MS4A4A-202ENST00000343968 DDB1Q16531 1140 aa17.72■□□□□ 0.43
MS4A4A-202ENST00000343968 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
MS4A4A-202ENST00000343968 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
MS4A4A-202ENST00000343968 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
MS4A4A-202ENST00000343968 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
MS4A4A-202ENST00000343968 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
MS4A4A-202ENST00000343968 GLI3P10071 1580 aa17.71■□□□□ 0.43
MS4A4A-202ENST00000343968 CABP4P57796 275 aa17.71■□□□□ 0.42
MS4A4A-202ENST00000343968 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.42
MS4A4A-202ENST00000343968 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 GJD4Q96KN9 370 aaPredicted RBP17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 PAPPAQ13219 1627 aa17.7■□□□□ 0.42
MS4A4A-202ENST00000343968 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
MS4A4A-202ENST00000343968 PLIN1O60240 522 aa17.69■□□□□ 0.42
MS4A4A-202ENST00000343968 KCNQ3O43525 872 aa17.68■□□□□ 0.42
MS4A4A-202ENST00000343968 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
MS4A4A-202ENST00000343968 ARHGAP45Q92619 1136 aa17.67■□□□□ 0.42
MS4A4A-202ENST00000343968 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
MS4A4A-202ENST00000343968 CACNA1FO60840 1977 aa17.67■□□□□ 0.42
MS4A4A-202ENST00000343968 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
MS4A4A-202ENST00000343968 ITGB4P16144 1822 aa17.66■□□□□ 0.42
MS4A4A-202ENST00000343968 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
MS4A4A-202ENST00000343968 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
MS4A4A-202ENST00000343968 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
MS4A4A-202ENST00000343968 MARCH10Q8NA82 808 aaPredicted RBP17.66■□□□□ 0.42
MS4A4A-202ENST00000343968 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
MS4A4A-202ENST00000343968 MS4A1P11836 297 aa17.65■□□□□ 0.42
MS4A4A-202ENST00000343968 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
MS4A4A-202ENST00000343968 BCL9O00512 1426 aa17.65■□□□□ 0.42
MS4A4A-202ENST00000343968 SLC39A6Q13433 755 aa17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 C20orf194Q5TEA3 1177 aa17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
MS4A4A-202ENST00000343968 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
MS4A4A-202ENST00000343968 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
MS4A4A-202ENST00000343968 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
MS4A4A-202ENST00000343968 KCPQ6ZWJ8 1503 aa17.63■□□□□ 0.41
MS4A4A-202ENST00000343968 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
MS4A4A-202ENST00000343968 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
MS4A4A-202ENST00000343968 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
MS4A4A-202ENST00000343968 PTPRCP08575 1304 aa17.62■□□□□ 0.41
MS4A4A-202ENST00000343968 TRIM27P14373 513 aa17.61■□□□□ 0.41
MS4A4A-202ENST00000343968 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
MS4A4A-202ENST00000343968 PIGBQ92521 554 aa17.61■□□□□ 0.41
MS4A4A-202ENST00000343968 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
MS4A4A-202ENST00000343968 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
MS4A4A-202ENST00000343968 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
MS4A4A-202ENST00000343968 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
MS4A4A-202ENST00000343968 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
MS4A4A-202ENST00000343968 C5P01031 1676 aa17.6■□□□□ 0.41
MS4A4A-202ENST00000343968 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
MS4A4A-202ENST00000343968 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
MS4A4A-202ENST00000343968 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
MS4A4A-202ENST00000343968 PPP4R2Q9NY27 417 aa17.59■□□□□ 0.41
MS4A4A-202ENST00000343968 LAMB4A4D0S4 1761 aa17.59■□□□□ 0.41
MS4A4A-202ENST00000343968 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.41
MS4A4A-202ENST00000343968 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.41
MS4A4A-202ENST00000343968 RLBP1P12271 317 aa17.58■□□□□ 0.4
MS4A4A-202ENST00000343968 AAMPQ13685 434 aa17.58■□□□□ 0.4
MS4A4A-202ENST00000343968 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
MS4A4A-202ENST00000343968 ABCC4O15439 1325 aa17.57■□□□□ 0.4
MS4A4A-202ENST00000343968 RGS12O14924 1447 aa17.57■□□□□ 0.4
MS4A4A-202ENST00000343968 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
MS4A4A-202ENST00000343968 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
MS4A4A-202ENST00000343968 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
MS4A4A-202ENST00000343968 FTSJ3Q8IY81 847 aaKnown RBP17.56■□□□□ 0.4
MS4A4A-202ENST00000343968 SEPT12Q8IYM1 358 aa17.56■□□□□ 0.4
MS4A4A-202ENST00000343968 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
MS4A4A-202ENST00000343968 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
MS4A4A-202ENST00000343968 PRAMEF22A3QJZ6 481 aa17.55■□□□□ 0.4
MS4A4A-202ENST00000343968 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
MS4A4A-202ENST00000343968 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
MS4A4A-202ENST00000343968 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
MS4A4A-202ENST00000343968 ASAP1Q9ULH1 1129 aa17.55■□□□□ 0.4
MS4A4A-202ENST00000343968 DDX21Q9NR30 783 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms