RNA–Protein interactions for RNA: ENST00000343788.10

SUGT1-202, Transcript of SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUGT1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGT1-202ENST00000343788 C10orf71Q711Q0 1435 aa16.17■□□□□ 0.18
SUGT1-202ENST00000343788 PLEKHG2Q9H7P9 1386 aa16.16■□□□□ 0.18
SUGT1-202ENST00000343788 KCNA3P22001 575 aa16.16■□□□□ 0.18
SUGT1-202ENST00000343788 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
SUGT1-202ENST00000343788 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
SUGT1-202ENST00000343788 HSP90AB2PQ58FF8 381 aa16.15■□□□□ 0.18
SUGT1-202ENST00000343788 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
SUGT1-202ENST00000343788 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
SUGT1-202ENST00000343788 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
SUGT1-202ENST00000343788 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
SUGT1-202ENST00000343788 SMG6Q86US8 1419 aaKnown RBP16.13■□□□□ 0.17
SUGT1-202ENST00000343788 TMF1P82094 1093 aa16.13■□□□□ 0.17
SUGT1-202ENST00000343788 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
SUGT1-202ENST00000343788 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
SUGT1-202ENST00000343788 SMC1BQ8NDV3 1235 aa16.13■□□□□ 0.17
SUGT1-202ENST00000343788 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
SUGT1-202ENST00000343788 PKD1L3Q7Z443 1732 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 CARD11Q9BXL7 1154 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 CCDC87Q9NVE4 849 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 INSRP06213 1382 aa16.12■□□□□ 0.17
SUGT1-202ENST00000343788 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
SUGT1-202ENST00000343788 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
SUGT1-202ENST00000343788 FYB1O15117 783 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 GYS1P13807 737 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 ARHGEF1Q92888 912 aaKnown RBP16.1■□□□□ 0.17
SUGT1-202ENST00000343788 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 PIM2Q9P1W9 311 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
SUGT1-202ENST00000343788 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
SUGT1-202ENST00000343788 SLC34A2O95436 690 aa16.09■□□□□ 0.17
SUGT1-202ENST00000343788 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
SUGT1-202ENST00000343788 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
SUGT1-202ENST00000343788 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.17
SUGT1-202ENST00000343788 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
SUGT1-202ENST00000343788 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
SUGT1-202ENST00000343788 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
SUGT1-202ENST00000343788 SBF1O95248 1867 aa16.07■□□□□ 0.16
SUGT1-202ENST00000343788 FLT4P35916 1363 aa16.06■□□□□ 0.16
SUGT1-202ENST00000343788 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
SUGT1-202ENST00000343788 KDRP35968 1356 aa16.05■□□□□ 0.16
SUGT1-202ENST00000343788 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
SUGT1-202ENST00000343788 CHRNA5P30532 468 aa16.04■□□□□ 0.16
SUGT1-202ENST00000343788 RFC4P35249 363 aa16.04■□□□□ 0.16
SUGT1-202ENST00000343788 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
SUGT1-202ENST00000343788 TESK2Q96S53 571 aa16.04■□□□□ 0.16
SUGT1-202ENST00000343788 RPS6KA4O75676 772 aa16.03■□□□□ 0.16
SUGT1-202ENST00000343788 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
SUGT1-202ENST00000343788 PHKG2P15735 406 aa16.03■□□□□ 0.16
SUGT1-202ENST00000343788 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.16
SUGT1-202ENST00000343788 RASSF7Q02833 373 aa16.02■□□□□ 0.16
SUGT1-202ENST00000343788 DDR1Q08345 913 aa16.02■□□□□ 0.16
SUGT1-202ENST00000343788 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
SUGT1-202ENST00000343788 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
SUGT1-202ENST00000343788 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
SUGT1-202ENST00000343788 IFNL2Q8IZJ0 200 aa16.01■□□□□ 0.15
SUGT1-202ENST00000343788 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
SUGT1-202ENST00000343788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.158e-7■□□□□ 10.9
SUGT1-202ENST00000343788 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
SUGT1-202ENST00000343788 MYH14Q7Z406 1995 aaKnown RBP16■□□□□ 0.15
SUGT1-202ENST00000343788 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
SUGT1-202ENST00000343788 FKBP8Q14318 412 aa16■□□□□ 0.15
SUGT1-202ENST00000343788 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
SUGT1-202ENST00000343788 TONSLQ96HA7 1378 aa16■□□□□ 0.15
SUGT1-202ENST00000343788 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
SUGT1-202ENST00000343788 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
SUGT1-202ENST00000343788 EYA1Q99502 592 aa15.99■□□□□ 0.15
SUGT1-202ENST00000343788 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
SUGT1-202ENST00000343788 POTECB2RU33 542 aa15.98■□□□□ 0.15
SUGT1-202ENST00000343788 FOXN1O15353 648 aa15.97■□□□□ 0.15
SUGT1-202ENST00000343788 LMNB1P20700 586 aa15.97■□□□□ 0.15
SUGT1-202ENST00000343788 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
SUGT1-202ENST00000343788 POLRMTO00411 1230 aaKnown RBP15.96■□□□□ 0.15
SUGT1-202ENST00000343788 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
SUGT1-202ENST00000343788 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
SUGT1-202ENST00000343788 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
SUGT1-202ENST00000343788 TM4SF1P30408 202 aa15.95■□□□□ 0.14
SUGT1-202ENST00000343788 CRKLP46109 303 aaKnown RBP15.94■□□□□ 0.14
SUGT1-202ENST00000343788 PRDM10Q9NQV6 1147 aa15.94■□□□□ 0.14
SUGT1-202ENST00000343788 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
SUGT1-202ENST00000343788 KIF20BQ96Q89 1820 aa15.94■□□□□ 0.14
SUGT1-202ENST00000343788 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
SUGT1-202ENST00000343788 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
SUGT1-202ENST00000343788 NFKBIEO00221 500 aa15.91■□□□□ 0.14
SUGT1-202ENST00000343788 PTCD1O75127 700 aaKnown RBP15.91■□□□□ 0.14
SUGT1-202ENST00000343788 CARD14Q9BXL6 1004 aa15.91■□□□□ 0.14
SUGT1-202ENST00000343788 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
SUGT1-202ENST00000343788 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
SUGT1-202ENST00000343788 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
SUGT1-202ENST00000343788 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
SUGT1-202ENST00000343788 CNTNAP1P78357 1384 aa15.89■□□□□ 0.13
SUGT1-202ENST00000343788 ANKRD26Q9UPS8 1709 aa15.89■□□□□ 0.13
SUGT1-202ENST00000343788 FAM161AQ3B820 660 aa15.89■□□□□ 0.13
SUGT1-202ENST00000343788 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
SUGT1-202ENST00000343788 INTS5Q6P9B9 1019 aaKnown RBP15.89■□□□□ 0.13
SUGT1-202ENST00000343788 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
SUGT1-202ENST00000343788 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
SUGT1-202ENST00000343788 CABP4P57796 275 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms