RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 ATP6V1AP38606 617 aa16.52■□□□□ 0.24
PDCD1-202ENST00000343705 COL23A1Q86Y22 540 aaPredicted RBP16.51■□□□□ 0.23
PDCD1-202ENST00000343705 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
PDCD1-202ENST00000343705 UBR3Q6ZT12 1888 aa16.5■□□□□ 0.23
PDCD1-202ENST00000343705 HMOX1P09601 288 aa16.5■□□□□ 0.23
PDCD1-202ENST00000343705 SSFA2P28290 1259 aa16.5■□□□□ 0.23
PDCD1-202ENST00000343705 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
PDCD1-202ENST00000343705 FHDC1Q9C0D6 1143 aaPredicted RBP16.5■□□□□ 0.23
PDCD1-202ENST00000343705 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
PDCD1-202ENST00000343705 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
PDCD1-202ENST00000343705 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
PDCD1-202ENST00000343705 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
PDCD1-202ENST00000343705 U2SURPO15042 1029 aaKnown RBP16.48■□□□□ 0.23
PDCD1-202ENST00000343705 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
PDCD1-202ENST00000343705 RC3H1Q5TC82 1133 aaKnown RBP16.47■□□□□ 0.23
PDCD1-202ENST00000343705 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
PDCD1-202ENST00000343705 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
PDCD1-202ENST00000343705 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
PDCD1-202ENST00000343705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
PDCD1-202ENST00000343705 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
PDCD1-202ENST00000343705 MTHFSDQ2M296 383 aaKnown RBP16.46■□□□□ 0.23
PDCD1-202ENST00000343705 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
PDCD1-202ENST00000343705 ADRA2BP18089 450 aa16.45■□□□□ 0.22
PDCD1-202ENST00000343705 ITPK1Q13572 414 aa16.45■□□□□ 0.22
PDCD1-202ENST00000343705 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
PDCD1-202ENST00000343705 ADAMTS7Q9UKP4 1686 aa16.44■□□□□ 0.22
PDCD1-202ENST00000343705 GNPATO15228 680 aa16.44■□□□□ 0.22
PDCD1-202ENST00000343705 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
PDCD1-202ENST00000343705 RTCBQ9Y3I0 505 aaKnown RBP16.44■□□□□ 0.22
PDCD1-202ENST00000343705 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
PDCD1-202ENST00000343705 MRC1P22897 1456 aa16.43■□□□□ 0.22
PDCD1-202ENST00000343705 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
PDCD1-202ENST00000343705 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
PDCD1-202ENST00000343705 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
PDCD1-202ENST00000343705 PHF14O94880 888 aa16.42■□□□□ 0.22
PDCD1-202ENST00000343705 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
PDCD1-202ENST00000343705 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
PDCD1-202ENST00000343705 PTCD1O75127 700 aaKnown RBP16.41■□□□□ 0.22
PDCD1-202ENST00000343705 FCHSD2O94868 740 aa16.41■□□□□ 0.22
PDCD1-202ENST00000343705 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
PDCD1-202ENST00000343705 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
PDCD1-202ENST00000343705 RPS6KA4O75676 772 aa16.4■□□□□ 0.22
PDCD1-202ENST00000343705 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
PDCD1-202ENST00000343705 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDCD1-202ENST00000343705 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
PDCD1-202ENST00000343705 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
PDCD1-202ENST00000343705 NEFMP07197 916 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 PRKAR2BP31323 418 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 TEFQ10587 303 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 MSL1Q68DK7 614 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 NLGN1Q8N2Q7 840 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 CHD4Q14839 1912 aa16.39■□□□□ 0.21
PDCD1-202ENST00000343705 RFC4P35249 363 aa16.38■□□□□ 0.21
PDCD1-202ENST00000343705 RALBP1Q15311 655 aa16.38■□□□□ 0.21
PDCD1-202ENST00000343705 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
PDCD1-202ENST00000343705 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
PDCD1-202ENST00000343705 YY1P25490 414 aa16.37■□□□□ 0.21
PDCD1-202ENST00000343705 GPR162Q16538 588 aa16.37■□□□□ 0.21
PDCD1-202ENST00000343705 AMIGO3Q86WK7 504 aa16.37■□□□□ 0.21
PDCD1-202ENST00000343705 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
PDCD1-202ENST00000343705 TJP1Q07157 1748 aa16.36■□□□□ 0.21
PDCD1-202ENST00000343705 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
PDCD1-202ENST00000343705 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
PDCD1-202ENST00000343705 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
PDCD1-202ENST00000343705 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
PDCD1-202ENST00000343705 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
PDCD1-202ENST00000343705 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
PDCD1-202ENST00000343705 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
PDCD1-202ENST00000343705 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
PDCD1-202ENST00000343705 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
PDCD1-202ENST00000343705 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
PDCD1-202ENST00000343705 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
PDCD1-202ENST00000343705 PHACTR3Q96KR7 559 aa16.34■□□□□ 0.21
PDCD1-202ENST00000343705 STARD3NLO95772 234 aa16.33■□□□□ 0.2
PDCD1-202ENST00000343705 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
PDCD1-202ENST00000343705 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
PDCD1-202ENST00000343705 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.2
PDCD1-202ENST00000343705 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
PDCD1-202ENST00000343705 C4AP0C0L4 1744 aa16.32■□□□□ 0.2
PDCD1-202ENST00000343705 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
PDCD1-202ENST00000343705 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
PDCD1-202ENST00000343705 MMP10P09238 476 aa16.31■□□□□ 0.2
PDCD1-202ENST00000343705 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
PDCD1-202ENST00000343705 GYS1P13807 737 aa16.31■□□□□ 0.2
PDCD1-202ENST00000343705 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
PDCD1-202ENST00000343705 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
PDCD1-202ENST00000343705 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
PDCD1-202ENST00000343705 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
PDCD1-202ENST00000343705 ZPR1O75312 459 aa16.3■□□□□ 0.2
PDCD1-202ENST00000343705 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
PDCD1-202ENST00000343705 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
PDCD1-202ENST00000343705 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
PDCD1-202ENST00000343705 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
PDCD1-202ENST00000343705 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
PDCD1-202ENST00000343705 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
PDCD1-202ENST00000343705 A0A087WZG4 1122 aa16.28■□□□□ 0.2
PDCD1-202ENST00000343705 TGFB2P61812 414 aa16.28■□□□□ 0.2
PDCD1-202ENST00000343705 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
PDCD1-202ENST00000343705 MYBBP1AQ9BQG0 1328 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms