RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 USP17L1Q7RTZ2 530 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 TRIM50Q86XT4 487 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 IRF7Q92985 503 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 FHDC1Q9C0D6 1143 aaPredicted RBP6.13□□□□□ -1.43
LRRC39-201ENST00000342895 RAB6BQ9NRW1 208 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 SENP3-EIF4A1A0A087X0R7 540 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 INHAP05111 366 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 CCDC155Q8N6L0 562 aa6.13□□□□□ -1.43
LRRC39-201ENST00000342895 ATP1A2P50993 1020 aa6.12□□□□□ -1.43
LRRC39-201ENST00000342895 GDF10P55107 478 aa6.12□□□□□ -1.43
LRRC39-201ENST00000342895 GTF2IP78347 998 aa6.12□□□□□ -1.43
LRRC39-201ENST00000342895 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
LRRC39-201ENST00000342895 SLC4A9Q96Q91 983 aa6.12□□□□□ -1.43
LRRC39-201ENST00000342895 PPP1R12CQ9BZL4 782 aa6.12□□□□□ -1.43
LRRC39-201ENST00000342895 TMEM229AB2RXF0 380 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 PRICKLE2Q7Z3G6 844 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 ZSCAN10Q96SZ4 725 aaPredicted RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 MAFBQ9Y5Q3 323 aaPredicted RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 NBPF10Q6P3W6 841 aaKnown RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 TAS1R3Q7RTX0 852 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 PPARGC1BQ86YN6 1023 aaKnown RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 NBPF15Q8N660 670 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 TFIP11Q9UBB9 837 aaKnown RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 ZNF777Q9ULD5 760 aaPredicted RBP6.11□□□□□ -1.43
LRRC39-201ENST00000342895 DYRK1BQ9Y463 629 aa6.11□□□□□ -1.43
LRRC39-201ENST00000342895 ITGA6P23229 1130 aa6.1□□□□□ -1.43
LRRC39-201ENST00000342895 GTF2E1P29083 439 aaPredicted RBP6.1□□□□□ -1.43
LRRC39-201ENST00000342895 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
LRRC39-201ENST00000342895 BACH1O14867 736 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 ZBTB7BO15156 539 aaPredicted RBP6.09□□□□□ -1.43
LRRC39-201ENST00000342895 VEGFBP49765 207 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 SMTNP53814 917 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 POU4F2Q12837 409 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 MTFR1Q15390 333 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 TLR1Q15399 786 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 LARGE2Q8N3Y3 721 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 RHBDD1Q8TEB9 315 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
LRRC39-201ENST00000342895 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.43
LRRC39-201ENST00000342895 M0R2N6 131 aa6.09□□□□□ -1.44
LRRC39-201ENST00000342895 STAU1O95793 577 aaKnown RBP6.09□□□□□ -1.44
LRRC39-201ENST00000342895 GNASQ5JWF2 1037 aa6.09□□□□□ -1.44
LRRC39-201ENST00000342895 ERBB4Q15303 1308 aa6.09□□□□□ -1.44
LRRC39-201ENST00000342895 CDK2AP1O14519 115 aa6.08□□□□□ -1.44
LRRC39-201ENST00000342895 RHOQP17081 205 aa6.08□□□□□ -1.44
LRRC39-201ENST00000342895 TMEM214Q6NUQ4 689 aaKnown RBP6.08□□□□□ -1.44
LRRC39-201ENST00000342895 SIX5Q8N196 739 aa6.08□□□□□ -1.44
LRRC39-201ENST00000342895 DNAAF2Q9NVR5 837 aaKnown RBP6.08□□□□□ -1.44
LRRC39-201ENST00000342895 A6NJY4 79 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 CLDN10P78369 228 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 ERICH6Q7L0X2 663 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 OGFOD1Q8N543 542 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 TIMMDC1Q9NPL8 285 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 ZNF358Q9NW07 568 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
LRRC39-201ENST00000342895 PSME1Q06323 249 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 C4orf17Q53FE4 359 aa6.07□□□□□ -1.44
LRRC39-201ENST00000342895 IQSEC3Q9UPP2 1182 aaPredicted RBP6.07□□□□□ -1.44
LRRC39-201ENST00000342895 A0A1B0GTH6 734 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 DKK1O94907 266 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 GMPRP36959 345 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 CFAP70Q5T0N1 1121 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 KANK4Q5T7N3 995 aaPredicted RBP6.06□□□□□ -1.44
LRRC39-201ENST00000342895 CCDC102BQ68D86 513 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 SV2AQ7L0J3 742 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 TRIM22Q8IYM9 498 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 ZNF295-AS1Q8N0V1 137 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
LRRC39-201ENST00000342895 SERTAD1Q9UHV2 236 aa6.06□□□□□ -1.44
LRRC39-201ENST00000342895 FAM196BA6NMK8 535 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 H7C1W4 665 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 F11P03951 625 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 LMOD1P29536 600 aaPredicted RBP6.05□□□□□ -1.44
LRRC39-201ENST00000342895 EPHA4P54764 986 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 LBRQ14739 615 aaKnown RBP6.05□□□□□ -1.44
LRRC39-201ENST00000342895 TPCN2Q8NHX9 752 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 NIFKQ9BYG3 293 aaKnown RBP6.05□□□□□ -1.44
LRRC39-201ENST00000342895 KIAA1024Q9UPX6 916 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 FOXK2Q01167 660 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 VRTNQ9H8Y1 702 aa6.05□□□□□ -1.44
LRRC39-201ENST00000342895 SCHIP1Q9P0W5 487 aaPredicted RBP6.05□□□□□ -1.44
LRRC39-201ENST00000342895 RASA1P20936 1047 aa6.04□□□□□ -1.44
LRRC39-201ENST00000342895 LARP1Q6PKG0 1096 aaKnown RBP6.04□□□□□ -1.44
LRRC39-201ENST00000342895 VWA5B2Q8N398 1253 aa6.04□□□□□ -1.44
LRRC39-201ENST00000342895 C1orf216Q8TAB5 229 aa6.04□□□□□ -1.44
LRRC39-201ENST00000342895 ZNF837Q96EG3 531 aaPredicted RBP6.04□□□□□ -1.44
LRRC39-201ENST00000342895 CUEDC1Q9NWM3 386 aaPredicted RBP6.04□□□□□ -1.44
LRRC39-201ENST00000342895 RBM19Q9Y4C8 960 aaKnown RBP6.04□□□□□ -1.44
LRRC39-201ENST00000342895 PTK7Q13308 1070 aa6.03□□□□□ -1.44
LRRC39-201ENST00000342895 GPR161Q8N6U8 529 aaKnown RBP6.03□□□□□ -1.44
LRRC39-201ENST00000342895 GAS2L1Q99501 681 aaPredicted RBP6.03□□□□□ -1.44
LRRC39-201ENST00000342895 PHKA2P46019 1235 aa6.02□□□□□ -1.44
LRRC39-201ENST00000342895 TEAD4Q15561 434 aa6.02□□□□□ -1.44
LRRC39-201ENST00000342895 DBN1Q16643 649 aa6.02□□□□□ -1.44
LRRC39-201ENST00000342895 C14orf37Q86TY3 774 aa6.02□□□□□ -1.44
LRRC39-201ENST00000342895 ZDHHC3Q9NYG2 299 aa6.02□□□□□ -1.44
LRRC39-201ENST00000342895 CDC14CA4D256 554 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms