RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 BTG4Q9NY30 223 aa21.93■■□□□ 1.1
FRMD4A-202ENST00000342409 UBAP1LF5GYI3 381 aa21.92■■□□□ 1.1
FRMD4A-202ENST00000342409 TEFQ10587 303 aa21.92■■□□□ 1.1
FRMD4A-202ENST00000342409 EIF4A1P60842 406 aaKnown RBP21.92■■□□□ 1.1
FRMD4A-202ENST00000342409 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
FRMD4A-202ENST00000342409 ABCC4O15439 1325 aa21.91■■□□□ 1.1
FRMD4A-202ENST00000342409 C5P01031 1676 aa21.9■■□□□ 1.1
FRMD4A-202ENST00000342409 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
FRMD4A-202ENST00000342409 EVA1CP58658 441 aa21.9■■□□□ 1.1
FRMD4A-202ENST00000342409 TOGARAM1Q9Y4F4 1720 aa21.9■■□□□ 1.1
FRMD4A-202ENST00000342409 BTBD11A6QL63 1104 aa21.89■■□□□ 1.1
FRMD4A-202ENST00000342409 PCDHB15Q9Y5E8 787 aa21.89■■□□□ 1.1
FRMD4A-202ENST00000342409 SOS1Q07889 1333 aaPredicted RBP21.89■■□□□ 1.1
FRMD4A-202ENST00000342409 NWD2Q9ULI1 1742 aa21.89■■□□□ 1.09
FRMD4A-202ENST00000342409 AAMPQ13685 434 aa21.89■■□□□ 1.09
FRMD4A-202ENST00000342409 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
FRMD4A-202ENST00000342409 G2E3Q7L622 706 aa21.88■■□□□ 1.09
FRMD4A-202ENST00000342409 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
FRMD4A-202ENST00000342409 IGHDP01880 384 aa21.87■■□□□ 1.09
FRMD4A-202ENST00000342409 IL2RBP14784 551 aa21.87■■□□□ 1.09
FRMD4A-202ENST00000342409 ZCRB1Q8TBF4 217 aaKnown RBP21.87■■□□□ 1.09
FRMD4A-202ENST00000342409 DISP2A7MBM2 1401 aa21.87■■□□□ 1.09
FRMD4A-202ENST00000342409 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 DDX19BQ9UMR2 479 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 GLI3P10071 1580 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 DCAF5Q96JK2 942 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
FRMD4A-202ENST00000342409 CENPQQ7L2Z9 268 aaPredicted RBP21.85■■□□□ 1.09
FRMD4A-202ENST00000342409 PAPPAQ13219 1627 aa21.85■■□□□ 1.09
FRMD4A-202ENST00000342409 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 PCDH11XQ9BZA7 1347 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 PCDH11YQ9BZA8 1340 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 ZBTB40Q9NUA8 1239 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 ITGB4P16144 1822 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 PTPRCP08575 1304 aa21.84■■□□□ 1.09
FRMD4A-202ENST00000342409 ADAMTS2O95450 1211 aa21.83■■□□□ 1.09
FRMD4A-202ENST00000342409 CCDC30Q5VVM6 783 aa21.83■■□□□ 1.09
FRMD4A-202ENST00000342409 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
FRMD4A-202ENST00000342409 HOXB7P09629 217 aa21.83■■□□□ 1.08
FRMD4A-202ENST00000342409 SKAP1Q86WV1 359 aa21.83■■□□□ 1.08
FRMD4A-202ENST00000342409 NFATC2IPQ8NCF5 419 aa21.83■■□□□ 1.08
FRMD4A-202ENST00000342409 CERKQ8TCT0 537 aa21.83■■□□□ 1.08
FRMD4A-202ENST00000342409 HSP90AB1P08238 724 aaKnown RBP21.82■■□□□ 1.08
FRMD4A-202ENST00000342409 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
FRMD4A-202ENST00000342409 ZBTB7BO15156 539 aaPredicted RBP21.81■■□□□ 1.08
FRMD4A-202ENST00000342409 NKX1-1Q15270 411 aaPredicted RBP21.81■■□□□ 1.08
FRMD4A-202ENST00000342409 SLIT2O94813 1529 aa21.81■■□□□ 1.08
FRMD4A-202ENST00000342409 SLC39A6Q13433 755 aa21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 HDGFL1Q5TGJ6 251 aa21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 NUTM2BA6NNL0 878 aaPredicted RBP21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 NUTM2EB1AL46 878 aaPredicted RBP21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 GIGYF1O75420 1035 aaPredicted RBP21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 NUTM2AQ8IVF1 878 aaPredicted RBP21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
FRMD4A-202ENST00000342409 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
FRMD4A-202ENST00000342409 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
FRMD4A-202ENST00000342409 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
FRMD4A-202ENST00000342409 JCADQ9P266 1359 aa21.77■■□□□ 1.08
FRMD4A-202ENST00000342409 FLIIQ13045 1269 aa21.77■■□□□ 1.08
FRMD4A-202ENST00000342409 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
FRMD4A-202ENST00000342409 DDX54Q8TDD1 881 aaKnown RBP21.76■■□□□ 1.07
FRMD4A-202ENST00000342409 F6X3S4 739 aa21.75■■□□□ 1.07
FRMD4A-202ENST00000342409 KAT6BQ8WYB5 2073 aa21.75■■□□□ 1.07
FRMD4A-202ENST00000342409 CABP4P57796 275 aa21.75■■□□□ 1.07
FRMD4A-202ENST00000342409 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
FRMD4A-202ENST00000342409 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
FRMD4A-202ENST00000342409 ERVV-2B6SEH9 535 aa21.74■■□□□ 1.07
FRMD4A-202ENST00000342409 LRP6O75581 1613 aa21.74■■□□□ 1.07
FRMD4A-202ENST00000342409 SPATA31A1Q5TZJ5 1347 aa21.74■■□□□ 1.07
FRMD4A-202ENST00000342409 KCPQ6ZWJ8 1503 aa21.73■■□□□ 1.07
FRMD4A-202ENST00000342409 ZNF496Q96IT1 587 aaPredicted RBP21.73■■□□□ 1.07
FRMD4A-202ENST00000342409 PXDNLA1KZ92 1463 aa21.72■■□□□ 1.07
FRMD4A-202ENST00000342409 ANXA1P04083 346 aa21.72■■□□□ 1.07
FRMD4A-202ENST00000342409 HDAC1Q13547 482 aaPredicted RBP21.72■■□□□ 1.07
FRMD4A-202ENST00000342409 TNS2Q63HR2 1409 aa21.71■■□□□ 1.07
FRMD4A-202ENST00000342409 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
FRMD4A-202ENST00000342409 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
FRMD4A-202ENST00000342409 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
FRMD4A-202ENST00000342409 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
FRMD4A-202ENST00000342409 FKBP5Q13451 457 aaPredicted RBP21.7■■□□□ 1.06
FRMD4A-202ENST00000342409 SPATA31A5Q5VU36 1347 aa21.7■■□□□ 1.06
FRMD4A-202ENST00000342409 SPATA31A7Q8IWB4 1347 aa21.7■■□□□ 1.06
FRMD4A-202ENST00000342409 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.7■■□□□ 1.06
FRMD4A-202ENST00000342409 BCL9LQ86UU0 1499 aa21.69■■□□□ 1.06
FRMD4A-202ENST00000342409 PDIA6Q15084 440 aa21.69■■□□□ 1.06
FRMD4A-202ENST00000342409 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
FRMD4A-202ENST00000342409 CHMP4AQ9BY43 222 aa21.68■■□□□ 1.06
FRMD4A-202ENST00000342409 CHMP4BQ9H444 224 aaKnown RBP21.68■■□□□ 1.06
FRMD4A-202ENST00000342409 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
FRMD4A-202ENST00000342409 ATP10DQ9P241 1426 aa21.68■■□□□ 1.06
FRMD4A-202ENST00000342409 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
FRMD4A-202ENST00000342409 MEIS3Q99687 375 aa21.67■■□□□ 1.06
FRMD4A-202ENST00000342409 CCT4P50991 539 aaKnown RBP21.66■■□□□ 1.06
FRMD4A-202ENST00000342409 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
FRMD4A-202ENST00000342409 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
FRMD4A-202ENST00000342409 THRAP3Q9Y2W1 955 aaKnown RBP21.66■■□□□ 1.06
FRMD4A-202ENST00000342409 ADCY9O60503 1353 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms