RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
PBX3-201ENST00000342287 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
PBX3-201ENST00000342287 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
PBX3-201ENST00000342287 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
PBX3-201ENST00000342287 KRT24Q2M2I5 525 aa18.47■□□□□ 0.55
PBX3-201ENST00000342287 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
PBX3-201ENST00000342287 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
PBX3-201ENST00000342287 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
PBX3-201ENST00000342287 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
PBX3-201ENST00000342287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
PBX3-201ENST00000342287 FAM208AQ9UK61 1670 aaKnown RBP18.45■□□□□ 0.54
PBX3-201ENST00000342287 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
PBX3-201ENST00000342287 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
PBX3-201ENST00000342287 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
PBX3-201ENST00000342287 CENPQQ7L2Z9 268 aaPredicted RBP18.44■□□□□ 0.54
PBX3-201ENST00000342287 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
PBX3-201ENST00000342287 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
PBX3-201ENST00000342287 WDR17Q8IZU2 1322 aa18.43■□□□□ 0.54
PBX3-201ENST00000342287 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
PBX3-201ENST00000342287 TEFQ10587 303 aa18.43■□□□□ 0.54
PBX3-201ENST00000342287 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
PBX3-201ENST00000342287 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
PBX3-201ENST00000342287 SOS1Q07889 1333 aaPredicted RBP18.42■□□□□ 0.54
PBX3-201ENST00000342287 AHDC1Q5TGY3 1603 aaPredicted RBP18.42■□□□□ 0.54
PBX3-201ENST00000342287 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
PBX3-201ENST00000342287 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
PBX3-201ENST00000342287 ARXQ96QS3 562 aa18.42■□□□□ 0.54
PBX3-201ENST00000342287 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
PBX3-201ENST00000342287 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
PBX3-201ENST00000342287 OVOS2A0A0G2JMS6 1433 aa18.41■□□□□ 0.54
PBX3-201ENST00000342287 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
PBX3-201ENST00000342287 API5Q9BZZ5 524 aaKnown RBP18.41■□□□□ 0.54
PBX3-201ENST00000342287 TOM1O60784 492 aa18.4■□□□□ 0.54
PBX3-201ENST00000342287 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
PBX3-201ENST00000342287 MEGF6O75095 1541 aa18.4■□□□□ 0.54
PBX3-201ENST00000342287 EVA1CP58658 441 aa18.39■□□□□ 0.53
PBX3-201ENST00000342287 BTBD11A6QL63 1104 aa18.39■□□□□ 0.53
PBX3-201ENST00000342287 CLCN1P35523 988 aa18.39■□□□□ 0.53
PBX3-201ENST00000342287 SLC4A2P04920 1241 aa18.38■□□□□ 0.53
PBX3-201ENST00000342287 PHKG2P15735 406 aa18.38■□□□□ 0.53
PBX3-201ENST00000342287 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
PBX3-201ENST00000342287 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
PBX3-201ENST00000342287 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
PBX3-201ENST00000342287 CCDC30Q5VVM6 783 aa18.37■□□□□ 0.53
PBX3-201ENST00000342287 PDCL3Q9H2J4 239 aa18.37■□□□□ 0.53
PBX3-201ENST00000342287 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
PBX3-201ENST00000342287 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
PBX3-201ENST00000342287 ABCC4O15439 1325 aa18.37■□□□□ 0.53
PBX3-201ENST00000342287 PTPRCP08575 1304 aa18.37■□□□□ 0.53
PBX3-201ENST00000342287 EIF4A1P60842 406 aaKnown RBP18.36■□□□□ 0.53
PBX3-201ENST00000342287 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
PBX3-201ENST00000342287 STRN4Q9NRL3 753 aa18.36■□□□□ 0.53
PBX3-201ENST00000342287 IGHDP01880 384 aa18.36■□□□□ 0.53
PBX3-201ENST00000342287 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
PBX3-201ENST00000342287 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
PBX3-201ENST00000342287 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
PBX3-201ENST00000342287 ZBTB40Q9NUA8 1239 aa18.35■□□□□ 0.53
PBX3-201ENST00000342287 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
PBX3-201ENST00000342287 HOXB7P09629 217 aa18.34■□□□□ 0.53
PBX3-201ENST00000342287 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
PBX3-201ENST00000342287 RWDD1Q9H446 243 aaPredicted RBP18.34■□□□□ 0.53
PBX3-201ENST00000342287 CYP27B1O15528 508 aa18.33■□□□□ 0.53
PBX3-201ENST00000342287 DCAF5Q96JK2 942 aa18.33■□□□□ 0.53
PBX3-201ENST00000342287 BTG4Q9NY30 223 aa18.33■□□□□ 0.53
PBX3-201ENST00000342287 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
PBX3-201ENST00000342287 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.52
PBX3-201ENST00000342287 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
PBX3-201ENST00000342287 ZBTB7BO15156 539 aaPredicted RBP18.32■□□□□ 0.52
PBX3-201ENST00000342287 KCNQ3O43525 872 aa18.32■□□□□ 0.52
PBX3-201ENST00000342287 IL2RBP14784 551 aa18.32■□□□□ 0.52
PBX3-201ENST00000342287 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
PBX3-201ENST00000342287 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
PBX3-201ENST00000342287 SLC52A2Q9HAB3 445 aa18.32■□□□□ 0.52
PBX3-201ENST00000342287 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
PBX3-201ENST00000342287 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
PBX3-201ENST00000342287 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
PBX3-201ENST00000342287 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
PBX3-201ENST00000342287 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
PBX3-201ENST00000342287 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
PBX3-201ENST00000342287 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
PBX3-201ENST00000342287 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
PBX3-201ENST00000342287 G2E3Q7L622 706 aa18.3■□□□□ 0.52
PBX3-201ENST00000342287 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
PBX3-201ENST00000342287 RGS12O14924 1447 aa18.29■□□□□ 0.52
PBX3-201ENST00000342287 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
PBX3-201ENST00000342287 UBAP1LF5GYI3 381 aa18.29■□□□□ 0.52
PBX3-201ENST00000342287 COL16A1Q07092 1604 aaPredicted RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 COL14A1Q05707 1796 aaKnown RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 FLIIQ13045 1269 aa18.28■□□□□ 0.52
PBX3-201ENST00000342287 HDAC1Q13547 482 aaPredicted RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
PBX3-201ENST00000342287 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.52
PBX3-201ENST00000342287 ZNF790Q6PG37 636 aa18.27■□□□□ 0.51
PBX3-201ENST00000342287 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
PBX3-201ENST00000342287 SIPA1L3O60292 1781 aaPredicted RBP18.26■□□□□ 0.51
PBX3-201ENST00000342287 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
PBX3-201ENST00000342287 CABP4P57796 275 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms