RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ARHGAP27Q6ZUM4 889 aa23■■□□□ 1.27
NECTIN1-202ENST00000340882 C10orf71Q711Q0 1435 aa22.99■■□□□ 1.27
NECTIN1-202ENST00000340882 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 DPEP1P16444 411 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 TGFB2P61812 414 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 C4AP0C0L4 1744 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 KIF24Q5T7B8 1368 aa22.98■■□□□ 1.27
NECTIN1-202ENST00000340882 PCNTO95613 3336 aa22.97■■□□□ 1.27
NECTIN1-202ENST00000340882 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
NECTIN1-202ENST00000340882 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
NECTIN1-202ENST00000340882 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
NECTIN1-202ENST00000340882 MYH14Q7Z406 1995 aaKnown RBP22.96■■□□□ 1.27
NECTIN1-202ENST00000340882 KCNA3P22001 575 aa22.95■■□□□ 1.26
NECTIN1-202ENST00000340882 SPG7Q9UQ90 795 aa22.95■■□□□ 1.26
NECTIN1-202ENST00000340882 KDRP35968 1356 aa22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 FCHSD2O94868 740 aa22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 RBM46Q8TBY0 533 aaKnown RBP22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 KLRG1Q96E93 195 aa22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 SBF1O95248 1867 aa22.94■■□□□ 1.26
NECTIN1-202ENST00000340882 PHKG2P15735 406 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 TMF1P82094 1093 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 C9orf131Q5VYM1 1079 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 ARHGEF1Q92888 912 aaKnown RBP22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 EYA1Q99502 592 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 CARD14Q9BXL6 1004 aa22.93■■□□□ 1.26
NECTIN1-202ENST00000340882 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
NECTIN1-202ENST00000340882 JMYQ8N9B5 988 aa22.92■■□□□ 1.26
NECTIN1-202ENST00000340882 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
NECTIN1-202ENST00000340882 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
NECTIN1-202ENST00000340882 CAPN15O75808 1086 aa22.91■■□□□ 1.26
NECTIN1-202ENST00000340882 GYS1P13807 737 aa22.91■■□□□ 1.26
NECTIN1-202ENST00000340882 NLGN1Q8N2Q7 840 aa22.91■■□□□ 1.26
NECTIN1-202ENST00000340882 RTCBQ9Y3I0 505 aaKnown RBP22.91■■□□□ 1.26
NECTIN1-202ENST00000340882 IFNL2Q8IZJ0 200 aa22.89■■□□□ 1.25
NECTIN1-202ENST00000340882 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
NECTIN1-202ENST00000340882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.89■■□□□ 1.25
NECTIN1-202ENST00000340882 SLC24A1O60721 1099 aa22.87■■□□□ 1.25
NECTIN1-202ENST00000340882 C16orf71Q8IYS4 520 aaPredicted RBP22.87■■□□□ 1.25
NECTIN1-202ENST00000340882 RBM42Q9BTD8 480 aaKnown RBP22.87■■□□□ 1.25
NECTIN1-202ENST00000340882 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
NECTIN1-202ENST00000340882 RRAGCQ9HB90 399 aa22.86■■□□□ 1.25
NECTIN1-202ENST00000340882 TNRC6CQ9HCJ0 1690 aaKnown RBP22.86■■□□□ 1.25
NECTIN1-202ENST00000340882 PLEKHG2Q9H7P9 1386 aa22.86■■□□□ 1.25
NECTIN1-202ENST00000340882 FSTL1Q12841 308 aa22.85■■□□□ 1.25
NECTIN1-202ENST00000340882 RC3H1Q5TC82 1133 aaKnown RBP22.85■■□□□ 1.25
NECTIN1-202ENST00000340882 DCAF5Q96JK2 942 aa22.85■■□□□ 1.25
NECTIN1-202ENST00000340882 PARP3Q9Y6F1 533 aa22.85■■□□□ 1.25
NECTIN1-202ENST00000340882 RPS6KA4O75676 772 aa22.84■■□□□ 1.25
NECTIN1-202ENST00000340882 RFC4P35249 363 aa22.84■■□□□ 1.25
NECTIN1-202ENST00000340882 CNTNAP4Q9C0A0 1308 aa22.83■■□□□ 1.25
NECTIN1-202ENST00000340882 ADRA2BP18089 450 aa22.83■■□□□ 1.25
NECTIN1-202ENST00000340882 RNF181Q9P0P0 153 aa22.83■■□□□ 1.25
NECTIN1-202ENST00000340882 PIM2Q9P1W9 311 aa22.83■■□□□ 1.25
NECTIN1-202ENST00000340882 TNS4Q8IZW8 715 aa22.82■■□□□ 1.24
NECTIN1-202ENST00000340882 SRP68Q9UHB9 627 aaKnown RBP22.82■■□□□ 1.24
NECTIN1-202ENST00000340882 CHRNA5P30532 468 aa22.81■■□□□ 1.24
NECTIN1-202ENST00000340882 DDR1Q08345 913 aa22.81■■□□□ 1.24
NECTIN1-202ENST00000340882 POLKQ9UBT6 870 aa22.81■■□□□ 1.24
NECTIN1-202ENST00000340882 KDM2BQ8NHM5 1336 aa22.81■■□□□ 1.24
NECTIN1-202ENST00000340882 FKBP8Q14318 412 aa22.8■■□□□ 1.24
NECTIN1-202ENST00000340882 DALRD3Q5D0E6 543 aaKnown RBP22.8■■□□□ 1.24
NECTIN1-202ENST00000340882 ADAMTS7Q9UKP4 1686 aa22.8■■□□□ 1.24
NECTIN1-202ENST00000340882 CCDC88AQ3V6T2 1871 aa22.79■■□□□ 1.24
NECTIN1-202ENST00000340882 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
NECTIN1-202ENST00000340882 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
NECTIN1-202ENST00000340882 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
NECTIN1-202ENST00000340882 TJP1Q07157 1748 aa22.79■■□□□ 1.24
NECTIN1-202ENST00000340882 PRELPP51888 382 aa22.78■■□□□ 1.24
NECTIN1-202ENST00000340882 AFDNP55196 1824 aaKnown RBP22.76■■□□□ 1.23
NECTIN1-202ENST00000340882 CRKLP46109 303 aaKnown RBP22.75■■□□□ 1.23
NECTIN1-202ENST00000340882 RASSF7Q02833 373 aa22.75■■□□□ 1.23
NECTIN1-202ENST00000340882 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
NECTIN1-202ENST00000340882 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
NECTIN1-202ENST00000340882 SMC1BQ8NDV3 1235 aa22.74■■□□□ 1.23
NECTIN1-202ENST00000340882 POLRMTO00411 1230 aaKnown RBP22.72■■□□□ 1.23
NECTIN1-202ENST00000340882 HSPA1AP0DMV8 641 aaKnown RBP22.72■■□□□ 1.23
NECTIN1-202ENST00000340882 HSPA1BP0DMV9 641 aaKnown RBP22.72■■□□□ 1.23
NECTIN1-202ENST00000340882 TNNT2P45379 298 aaPredicted RBP22.72■■□□□ 1.23
NECTIN1-202ENST00000340882 CABP4P57796 275 aa22.72■■□□□ 1.23
NECTIN1-202ENST00000340882 TIAM2Q8IVF5 1701 aa22.71■■□□□ 1.23
NECTIN1-202ENST00000340882 TM4SF1P30408 202 aa22.71■■□□□ 1.23
NECTIN1-202ENST00000340882 CDCA8Q53HL2 280 aa22.71■■□□□ 1.23
NECTIN1-202ENST00000340882 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
NECTIN1-202ENST00000340882 ZNF530Q6P9A1 599 aaPredicted RBP22.7■■□□□ 1.22
NECTIN1-202ENST00000340882 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
NECTIN1-202ENST00000340882 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
NECTIN1-202ENST00000340882 NFATC2IPQ8NCF5 419 aa22.68■■□□□ 1.22
NECTIN1-202ENST00000340882 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
NECTIN1-202ENST00000340882 NRXN2Q9P2S2 1712 aa22.68■■□□□ 1.22
NECTIN1-202ENST00000340882 PLEKHO1Q53GL0 409 aaPredicted RBP22.67■■□□□ 1.22
NECTIN1-202ENST00000340882 GLTPD2A6NH11 291 aa22.66■■□□□ 1.22
NECTIN1-202ENST00000340882 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
NECTIN1-202ENST00000340882 MTHFSP49914 203 aa22.65■■□□□ 1.22
NECTIN1-202ENST00000340882 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
NECTIN1-202ENST00000340882 POTECB2RU33 542 aa22.64■■□□□ 1.21
NECTIN1-202ENST00000340882 VEGFAP15692 232 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms