RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 ADCY9O60503 1353 aa19.08■□□□□ 0.64
UPK3BL1-201ENST00000340457 EIF4A2Q14240 407 aaKnown RBP19.07■□□□□ 0.64
UPK3BL1-201ENST00000340457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.07■□□□□ 0.64
UPK3BL1-201ENST00000340457 MMP10P09238 476 aa19.06■□□□□ 0.64
UPK3BL1-201ENST00000340457 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
UPK3BL1-201ENST00000340457 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
UPK3BL1-201ENST00000340457 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
UPK3BL1-201ENST00000340457 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
UPK3BL1-201ENST00000340457 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
UPK3BL1-201ENST00000340457 KDRP35968 1356 aa19.01■□□□□ 0.63
UPK3BL1-201ENST00000340457 HSPA6P17066 643 aa19■□□□□ 0.63
UPK3BL1-201ENST00000340457 N4BP2Q86UW6 1770 aaPredicted RBP19■□□□□ 0.63
UPK3BL1-201ENST00000340457 PXDNLA1KZ92 1463 aa19■□□□□ 0.63
UPK3BL1-201ENST00000340457 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
UPK3BL1-201ENST00000340457 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
UPK3BL1-201ENST00000340457 BCS1LQ9Y276 419 aa19■□□□□ 0.63
UPK3BL1-201ENST00000340457 IFFO2Q5TF58 517 aa18.99■□□□□ 0.63
UPK3BL1-201ENST00000340457 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
UPK3BL1-201ENST00000340457 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
UPK3BL1-201ENST00000340457 KIF3CO14782 793 aa18.98■□□□□ 0.63
UPK3BL1-201ENST00000340457 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
UPK3BL1-201ENST00000340457 KIAA1551Q9HCM1 1747 aa18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 CABP4P57796 275 aa18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 PLEKHO1Q53GL0 409 aaPredicted RBP18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 NLGN1Q8N2Q7 840 aa18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 PANK3Q9H999 370 aa18.97■□□□□ 0.63
UPK3BL1-201ENST00000340457 MYH14Q7Z406 1995 aaKnown RBP18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 GYS1P13807 737 aa18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 DPEP1P16444 411 aa18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 RFC4P35249 363 aa18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 ARHGAP27Q6ZUM4 889 aa18.96■□□□□ 0.63
UPK3BL1-201ENST00000340457 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
UPK3BL1-201ENST00000340457 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
UPK3BL1-201ENST00000340457 TGFB2P61812 414 aa18.95■□□□□ 0.62
UPK3BL1-201ENST00000340457 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
UPK3BL1-201ENST00000340457 C10orf71Q711Q0 1435 aa18.94■□□□□ 0.62
UPK3BL1-201ENST00000340457 COL5A3P25940 1745 aaPredicted RBP18.94■□□□□ 0.62
UPK3BL1-201ENST00000340457 CCDC87Q9NVE4 849 aa18.94■□□□□ 0.62
UPK3BL1-201ENST00000340457 CNTNAP4Q9C0A0 1308 aa18.94■□□□□ 0.62
UPK3BL1-201ENST00000340457 FCHSD2O94868 740 aa18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 ADRA2BP18089 450 aa18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 MTHFSP49914 203 aa18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 PARP3Q9Y6F1 533 aa18.93■□□□□ 0.62
UPK3BL1-201ENST00000340457 C4AP0C0L4 1744 aa18.92■□□□□ 0.62
UPK3BL1-201ENST00000340457 NFATC2IPQ8NCF5 419 aa18.92■□□□□ 0.62
UPK3BL1-201ENST00000340457 CRKLP46109 303 aaKnown RBP18.91■□□□□ 0.62
UPK3BL1-201ENST00000340457 AMOTQ4VCS5 1084 aa18.91■□□□□ 0.62
UPK3BL1-201ENST00000340457 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
UPK3BL1-201ENST00000340457 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
UPK3BL1-201ENST00000340457 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
UPK3BL1-201ENST00000340457 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
UPK3BL1-201ENST00000340457 NMRK2Q9NPI5 230 aa18.9■□□□□ 0.62
UPK3BL1-201ENST00000340457 PLEKHG2Q9H7P9 1386 aa18.9■□□□□ 0.62
UPK3BL1-201ENST00000340457 KCNA3P22001 575 aa18.89■□□□□ 0.61
UPK3BL1-201ENST00000340457 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.61
UPK3BL1-201ENST00000340457 FKBP8Q14318 412 aa18.89■□□□□ 0.61
UPK3BL1-201ENST00000340457 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
UPK3BL1-201ENST00000340457 DDR1Q08345 913 aa18.87■□□□□ 0.61
UPK3BL1-201ENST00000340457 C9orf131Q5VYM1 1079 aa18.87■□□□□ 0.61
UPK3BL1-201ENST00000340457 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
UPK3BL1-201ENST00000340457 TOMM70O94826 608 aa18.85■□□□□ 0.61
UPK3BL1-201ENST00000340457 CHRNA5P30532 468 aa18.85■□□□□ 0.61
UPK3BL1-201ENST00000340457 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
UPK3BL1-201ENST00000340457 TJP1Q07157 1748 aa18.85■□□□□ 0.61
UPK3BL1-201ENST00000340457 IL13P35225 146 aa18.84■□□□□ 0.61
UPK3BL1-201ENST00000340457 APLP1P51693 650 aa18.84■□□□□ 0.61
UPK3BL1-201ENST00000340457 INTS5Q6P9B9 1019 aaKnown RBP18.84■□□□□ 0.61
UPK3BL1-201ENST00000340457 DALRD3Q5D0E6 543 aaKnown RBP18.83■□□□□ 0.61
UPK3BL1-201ENST00000340457 DNAJC10Q8IXB1 793 aa18.83■□□□□ 0.61
UPK3BL1-201ENST00000340457 LGR6Q9HBX8 967 aa18.83■□□□□ 0.61
UPK3BL1-201ENST00000340457 ARFGEF1Q9Y6D6 1849 aa18.82■□□□□ 0.6
UPK3BL1-201ENST00000340457 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 POLRMTO00411 1230 aaKnown RBP18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 USPL1Q5W0Q7 1092 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 KNSTRNQ9Y448 316 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
UPK3BL1-201ENST00000340457 HMOX1P09601 288 aa18.8■□□□□ 0.6
UPK3BL1-201ENST00000340457 HTRA3P83110 453 aa18.8■□□□□ 0.6
UPK3BL1-201ENST00000340457 DNAJC5GQ8N7S2 189 aa18.8■□□□□ 0.6
UPK3BL1-201ENST00000340457 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
UPK3BL1-201ENST00000340457 ZPR1O75312 459 aa18.79■□□□□ 0.6
UPK3BL1-201ENST00000340457 TM4SF1P30408 202 aa18.79■□□□□ 0.6
UPK3BL1-201ENST00000340457 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
UPK3BL1-201ENST00000340457 SLC52A2Q9HAB3 445 aa18.79■□□□□ 0.6
UPK3BL1-201ENST00000340457 C16orf71Q8IYS4 520 aaPredicted RBP18.78■□□□□ 0.6
UPK3BL1-201ENST00000340457 ADAMTS7Q9UKP4 1686 aa18.78■□□□□ 0.6
UPK3BL1-201ENST00000340457 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
UPK3BL1-201ENST00000340457 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
UPK3BL1-201ENST00000340457 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
UPK3BL1-201ENST00000340457 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
UPK3BL1-201ENST00000340457 RRAGCQ9HB90 399 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms