RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CCDC9Q9Y3X0 531 aaKnown RBP10.13□□□□□ -0.79
TMC1-202ENST00000340019 EXOC5O00471 708 aa10.12□□□□□ -0.79
TMC1-202ENST00000340019 VAMP4O75379 141 aa10.12□□□□□ -0.79
TMC1-202ENST00000340019 DDX54Q8TDD1 881 aaKnown RBP10.12□□□□□ -0.79
TMC1-202ENST00000340019 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
TMC1-202ENST00000340019 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
TMC1-202ENST00000340019 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
TMC1-202ENST00000340019 BCAR3O75815 825 aa10.11□□□□□ -0.79
TMC1-202ENST00000340019 DDB1Q16531 1140 aa10.11□□□□□ -0.79
TMC1-202ENST00000340019 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
TMC1-202ENST00000340019 TWISTNBQ3B726 338 aaPredicted RBP10.11□□□□□ -0.79
TMC1-202ENST00000340019 ITGB4P16144 1822 aa10.11□□□□□ -0.79
TMC1-202ENST00000340019 PAPPAQ13219 1627 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 FAM98CQ17RN3 349 aaKnown RBP10.1□□□□□ -0.79
TMC1-202ENST00000340019 NFATC2IPQ8NCF5 419 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
TMC1-202ENST00000340019 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
TMC1-202ENST00000340019 GTF3C3Q9Y5Q9 886 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 HEG1Q9ULI3 1381 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 EIF4A1P60842 406 aaKnown RBP10.1□□□□□ -0.79
TMC1-202ENST00000340019 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
TMC1-202ENST00000340019 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
TMC1-202ENST00000340019 KCNQ3O43525 872 aa10.09□□□□□ -0.79
TMC1-202ENST00000340019 ONECUT3O60422 494 aaPredicted RBP10.09□□□□□ -0.79
TMC1-202ENST00000340019 SSH1Q8WYL5 1049 aa10.09□□□□□ -0.79
TMC1-202ENST00000340019 UBR2Q8IWV8 1755 aa10.09□□□□□ -0.79
TMC1-202ENST00000340019 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
TMC1-202ENST00000340019 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
TMC1-202ENST00000340019 CABP4P57796 275 aa10.09□□□□□ -0.79
TMC1-202ENST00000340019 DOT1LQ8TEK3 1739 aa10.09□□□□□ -0.79
TMC1-202ENST00000340019 ZNF790Q6PG37 636 aa10.08□□□□□ -0.8
TMC1-202ENST00000340019 MARCH10Q8NA82 808 aaPredicted RBP10.08□□□□□ -0.8
TMC1-202ENST00000340019 PLIN1O60240 522 aa10.08□□□□□ -0.8
TMC1-202ENST00000340019 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
TMC1-202ENST00000340019 NEFLP07196 543 aa10.07□□□□□ -0.8
TMC1-202ENST00000340019 QTRT2Q9H974 415 aaKnown RBP10.07□□□□□ -0.8
TMC1-202ENST00000340019 CACNA1FO60840 1977 aa10.07□□□□□ -0.8
TMC1-202ENST00000340019 HOXB7P09629 217 aa10.07□□□□□ -0.8
TMC1-202ENST00000340019 FKBP8Q14318 412 aa10.07□□□□□ -0.8
TMC1-202ENST00000340019 SMC4Q9NTJ3 1288 aa10.07□□□□□ -0.8
TMC1-202ENST00000340019 IRX6P78412 446 aaPredicted RBP10.06□□□□□ -0.8
TMC1-202ENST00000340019 SLC39A6Q13433 755 aa10.06□□□□□ -0.8
TMC1-202ENST00000340019 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
TMC1-202ENST00000340019 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.06□□□□□ -0.8
TMC1-202ENST00000340019 C5P01031 1676 aa10.06□□□□□ -0.8
TMC1-202ENST00000340019 BCL9O00512 1426 aa10.06□□□□□ -0.8
TMC1-202ENST00000340019 KCPQ6ZWJ8 1503 aa10.06□□□□□ -0.8
TMC1-202ENST00000340019 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
TMC1-202ENST00000340019 ZNF772Q68DY9 489 aaPredicted RBP10.05□□□□□ -0.8
TMC1-202ENST00000340019 PIGBQ92521 554 aa10.05□□□□□ -0.8
TMC1-202ENST00000340019 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
TMC1-202ENST00000340019 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
TMC1-202ENST00000340019 KAT6BQ8WYB5 2073 aa10.05□□□□□ -0.8
TMC1-202ENST00000340019 KIF16BQ96L93 1317 aa10.04□□□□□ -0.8
TMC1-202ENST00000340019 ZNF496Q96IT1 587 aaPredicted RBP10.04□□□□□ -0.8
TMC1-202ENST00000340019 LAMB4A4D0S4 1761 aa10.04□□□□□ -0.8
TMC1-202ENST00000340019 TTC5Q8N0Z6 440 aa10.04□□□□□ -0.8
TMC1-202ENST00000340019 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
TMC1-202ENST00000340019 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
TMC1-202ENST00000340019 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 TCERG1O14776 1098 aaKnown RBP10.03□□□□□ -0.8
TMC1-202ENST00000340019 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 PRAMEF22A3QJZ6 481 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 PRIM1P49642 420 aaKnown RBP10.03□□□□□ -0.8
TMC1-202ENST00000340019 CCDC30Q5VVM6 783 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 ZKSCAN2Q63HK3 967 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 FMNL2Q96PY5 1086 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 A0A0G2JS52 829 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
TMC1-202ENST00000340019 MSH5O43196 834 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 TRIM27P14373 513 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 ATF7IPQ6VMQ6 1270 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 NHSQ6T4R5 1651 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
TMC1-202ENST00000340019 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
TMC1-202ENST00000340019 RBM6P78332 1123 aaKnown RBP10.02□□□□□ -0.81
TMC1-202ENST00000340019 CHMP4AQ9BY43 222 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
TMC1-202ENST00000340019 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
TMC1-202ENST00000340019 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
TMC1-202ENST00000340019 RGS12O14924 1447 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 RLBP1P12271 317 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 EP400Q96L91 3159 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 EIF2S2P20042 333 aaKnown RBP10.01□□□□□ -0.81
TMC1-202ENST00000340019 NECTIN2Q92692 538 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 SYTL4Q96C24 671 aaPredicted RBP10.01□□□□□ -0.81
TMC1-202ENST00000340019 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 STK31Q9BXU1 1019 aa10.01□□□□□ -0.81
TMC1-202ENST00000340019 PTPRCP08575 1304 aa10□□□□□ -0.81
TMC1-202ENST00000340019 EXOC6Q8TAG9 804 aa10□□□□□ -0.81
TMC1-202ENST00000340019 PANK1Q8TE04 598 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms