RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 V9GYY5 206 aaPredicted RBP13.95□□□□□ -0.18
ZNF648-201ENST00000339948 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
ZNF648-201ENST00000339948 ZNF771Q7L3S4 317 aaPredicted RBP13.95□□□□□ -0.18
ZNF648-201ENST00000339948 PDLIM2Q96JY6 352 aa13.95□□□□□ -0.18
ZNF648-201ENST00000339948 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
ZNF648-201ENST00000339948 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 IL25Q9H293 177 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
ZNF648-201ENST00000339948 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
ZNF648-201ENST00000339948 PDCL2Q8N4E4 241 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 ABCC1P33527 1531 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
ZNF648-201ENST00000339948 SPHKAPQ2M3C7 1700 aa13.93□□□□□ -0.18
ZNF648-201ENST00000339948 CCDC183Q5T5S1 534 aa13.93□□□□□ -0.18
ZNF648-201ENST00000339948 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
ZNF648-201ENST00000339948 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
ZNF648-201ENST00000339948 AK2P54819 239 aa13.93□□□□□ -0.18
ZNF648-201ENST00000339948 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
ZNF648-201ENST00000339948 STX6O43752 255 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 HS1BP3Q53T59 392 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 SYT1P21579 422 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 FLIIQ13045 1269 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 MCM2P49736 904 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 PYCARDQ9ULZ3 195 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 RIMS2Q9UQ26 1411 aa13.92□□□□□ -0.18
ZNF648-201ENST00000339948 PTGS1P23219 599 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 GJB2P29033 226 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
ZNF648-201ENST00000339948 LUZP1Q86V48 1076 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 SIL1Q9H173 461 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
ZNF648-201ENST00000339948 CCT4P50991 539 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 MYOM2P54296 1465 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 HSP90B1P14625 803 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 LRMPQ12912 555 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 PHAXQ9H814 394 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 ZSCAN22P10073 491 aaPredicted RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 MTHFSDQ2M296 383 aaKnown RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 PPP1R42Q7Z4L9 355 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
ZNF648-201ENST00000339948 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
ZNF648-201ENST00000339948 GNAI3P08754 354 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 NAA30Q147X3 362 aaPredicted RBP13.89□□□□□ -0.19
ZNF648-201ENST00000339948 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
ZNF648-201ENST00000339948 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 A0A087WWV3 80 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 LARGE1O95461 756 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
ZNF648-201ENST00000339948 AIMP1Q12904 312 aaKnown RBP13.89□□□□□ -0.19
ZNF648-201ENST00000339948 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 WASLO00401 505 aaPredicted RBP13.89□□□□□ -0.19
ZNF648-201ENST00000339948 MCM5P33992 734 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
ZNF648-201ENST00000339948 GOLGA6L6A8MZA4 724 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 CLEC17AQ6ZS10 378 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 KDM4AO75164 1064 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 TPD52L1Q16890 204 aaPredicted RBP13.88□□□□□ -0.19
ZNF648-201ENST00000339948 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
ZNF648-201ENST00000339948 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 PA2G4Q9UQ80 394 aaKnown RBP13.87□□□□□ -0.19
ZNF648-201ENST00000339948 ATP6V1DQ9Y5K8 247 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 SLC26A8Q96RN1 970 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 CHL1O00533 1208 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 CCDC192P0DO97 292 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 CNTROBQ8N137 903 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 FMNL2Q96PY5 1086 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 NRBP1Q9UHY1 535 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 LIMCH1Q9UPQ0 1083 aa13.87□□□□□ -0.19
ZNF648-201ENST00000339948 QRICH2Q9H0J4 1663 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 ERICH4A6NGS2 130 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 F13A1P00488 732 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
ZNF648-201ENST00000339948 UBE2HP62256 183 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 C9orf78Q9NZ63 289 aaPredicted RBP13.86□□□□□ -0.19
ZNF648-201ENST00000339948 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
ZNF648-201ENST00000339948 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
ZNF648-201ENST00000339948 PTCH1Q13635 1447 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms