RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 C1orf141Q5JVX7 400 aa26.47■■□□□ 1.83
ITGA4-202ENST00000339307 SULT6B1Q6IMI4 303 aa26.47■■□□□ 1.83
ITGA4-202ENST00000339307 DCAF5Q96JK2 942 aa26.47■■□□□ 1.83
ITGA4-202ENST00000339307 CABP4P57796 275 aa26.46■■□□□ 1.83
ITGA4-202ENST00000339307 ITPK1Q13572 414 aa26.46■■□□□ 1.83
ITGA4-202ENST00000339307 CHD4Q14839 1912 aa26.45■■□□□ 1.82
ITGA4-202ENST00000339307 ERVV-2B6SEH9 535 aa26.45■■□□□ 1.82
ITGA4-202ENST00000339307 MTHFSP49914 203 aa26.45■■□□□ 1.82
ITGA4-202ENST00000339307 CNGB1Q14028 1251 aaPredicted RBP26.45■■□□□ 1.82
ITGA4-202ENST00000339307 SSFA2P28290 1259 aa26.44■■□□□ 1.82
ITGA4-202ENST00000339307 UTRNP46939 3433 aa26.44■■□□□ 1.82
ITGA4-202ENST00000339307 AMER1Q5JTC6 1135 aaPredicted RBP26.42■■□□□ 1.82
ITGA4-202ENST00000339307 CC2D1BQ5T0F9 858 aaKnown RBP26.42■■□□□ 1.82
ITGA4-202ENST00000339307 PLEKHG2Q9H7P9 1386 aa26.42■■□□□ 1.82
ITGA4-202ENST00000339307 UBR3Q6ZT12 1888 aa26.41■■□□□ 1.82
ITGA4-202ENST00000339307 IL13P35225 146 aa26.4■■□□□ 1.82
ITGA4-202ENST00000339307 CD2APQ9Y5K6 639 aa26.4■■□□□ 1.82
ITGA4-202ENST00000339307 YBX3P16989 372 aaKnown RBP eCLIP26.39■■□□□ 1.82
ITGA4-202ENST00000339307 GRIN3BO60391 1043 aa26.39■■□□□ 1.81
ITGA4-202ENST00000339307 RTCBQ9Y3I0 505 aaKnown RBP26.38■■□□□ 1.81
ITGA4-202ENST00000339307 PTCD1O75127 700 aaKnown RBP26.37■■□□□ 1.81
ITGA4-202ENST00000339307 TRAPPC3LQ5T215 181 aa26.37■■□□□ 1.81
ITGA4-202ENST00000339307 KDM6AO15550 1401 aaPredicted RBP26.36■■□□□ 1.81
ITGA4-202ENST00000339307 NFATC2IPQ8NCF5 419 aa26.36■■□□□ 1.81
ITGA4-202ENST00000339307 WWC3Q9ULE0 1092 aa26.36■■□□□ 1.81
ITGA4-202ENST00000339307 HMOX1P09601 288 aa26.35■■□□□ 1.81
ITGA4-202ENST00000339307 SLC4A9Q96Q91 983 aa26.35■■□□□ 1.81
ITGA4-202ENST00000339307 KDRP35968 1356 aa26.33■■□□□ 1.8
ITGA4-202ENST00000339307 PER1O15534 1290 aaPredicted RBP26.31■■□□□ 1.8
ITGA4-202ENST00000339307 DIAPH1O60610 1272 aaKnown RBP26.31■■□□□ 1.8
ITGA4-202ENST00000339307 MMP10P09238 476 aa26.31■■□□□ 1.8
ITGA4-202ENST00000339307 RFC4P35249 363 aa26.31■■□□□ 1.8
ITGA4-202ENST00000339307 AKAP4Q5JQC9 854 aa26.3■■□□□ 1.8
ITGA4-202ENST00000339307 ARHGEF1Q92888 912 aaKnown RBP26.3■■□□□ 1.8
ITGA4-202ENST00000339307 RC3H1Q5TC82 1133 aaKnown RBP26.29■■□□□ 1.8
ITGA4-202ENST00000339307 RPS6KA4O75676 772 aa26.27■■□□□ 1.8
ITGA4-202ENST00000339307 NLGN1Q8N2Q7 840 aa26.27■■□□□ 1.8
ITGA4-202ENST00000339307 CNTNAP4Q9C0A0 1308 aa26.27■■□□□ 1.8
ITGA4-202ENST00000339307 GOLGB1Q14789 3259 aaKnown RBP26.27■■□□□ 1.8
ITGA4-202ENST00000339307 ADRA2BP18089 450 aa26.26■■□□□ 1.79
ITGA4-202ENST00000339307 LGR6Q9HBX8 967 aa26.26■■□□□ 1.79
ITGA4-202ENST00000339307 U2SURPO15042 1029 aaKnown RBP26.24■■□□□ 1.79
ITGA4-202ENST00000339307 CRKLP46109 303 aaKnown RBP26.24■■□□□ 1.79
ITGA4-202ENST00000339307 SLC52A2Q9HAB3 445 aa26.23■■□□□ 1.79
ITGA4-202ENST00000339307 GIGYF1O75420 1035 aaPredicted RBP26.22■■□□□ 1.79
ITGA4-202ENST00000339307 MTHFSDQ2M296 383 aaKnown RBP26.22■■□□□ 1.79
ITGA4-202ENST00000339307 COL5A3P25940 1745 aaPredicted RBP26.22■■□□□ 1.79
ITGA4-202ENST00000339307 ZNF831Q5JPB2 1677 aa26.22■■□□□ 1.79
ITGA4-202ENST00000339307 RNMTO43148 476 aaKnown RBP26.22■■□□□ 1.79
ITGA4-202ENST00000339307 SCN11AQ9UI33 1791 aa26.21■■□□□ 1.79
ITGA4-202ENST00000339307 GYS1P13807 737 aa26.21■■□□□ 1.79
ITGA4-202ENST00000339307 C1QTNF8P60827 252 aa26.21■■□□□ 1.79
ITGA4-202ENST00000339307 SLC39A6Q13433 755 aa26.21■■□□□ 1.79
ITGA4-202ENST00000339307 PARP3Q9Y6F1 533 aa26.21■■□□□ 1.79
ITGA4-202ENST00000339307 CCDC87Q9NVE4 849 aa26.19■■□□□ 1.78
ITGA4-202ENST00000339307 CICQ96RK0 1608 aaPredicted RBP26.19■■□□□ 1.78
ITGA4-202ENST00000339307 DNAJC10Q8IXB1 793 aa26.18■■□□□ 1.78
ITGA4-202ENST00000339307 SRP68Q9UHB9 627 aaKnown RBP26.18■■□□□ 1.78
ITGA4-202ENST00000339307 SENP3-EIF4A1A0A087X0R7 540 aa26.17■■□□□ 1.78
ITGA4-202ENST00000339307 MYH14Q7Z406 1995 aaKnown RBP26.17■■□□□ 1.78
ITGA4-202ENST00000339307 A0A0G2JLW4 131 aa26.16■■□□□ 1.78
ITGA4-202ENST00000339307 ZNF526Q8TF50 670 aaPredicted RBP26.15■■□□□ 1.78
ITGA4-202ENST00000339307 TGFB2P61812 414 aa26.14■■□□□ 1.78
ITGA4-202ENST00000339307 INTS5Q6P9B9 1019 aaKnown RBP26.14■■□□□ 1.78
ITGA4-202ENST00000339307 BCS1LQ9Y276 419 aa26.14■■□□□ 1.78
ITGA4-202ENST00000339307 NPC1L1Q9UHC9 1359 aa26.14■■□□□ 1.78
ITGA4-202ENST00000339307 ATP10DQ9P241 1426 aa26.14■■□□□ 1.77
ITGA4-202ENST00000339307 TJP1Q07157 1748 aa26.14■■□□□ 1.77
ITGA4-202ENST00000339307 ZPR1O75312 459 aa26.13■■□□□ 1.77
ITGA4-202ENST00000339307 FKBP8Q14318 412 aa26.13■■□□□ 1.77
ITGA4-202ENST00000339307 CFAP53Q96M91 514 aa26.13■■□□□ 1.77
ITGA4-202ENST00000339307 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
ITGA4-202ENST00000339307 TTC5Q8N0Z6 440 aa26.12■■□□□ 1.77
ITGA4-202ENST00000339307 GPBP1L1Q9HC44 474 aaPredicted RBP26.12■■□□□ 1.77
ITGA4-202ENST00000339307 USP42Q9H9J4 1324 aaKnown RBP26.11■■□□□ 1.77
ITGA4-202ENST00000339307 PXDNLA1KZ92 1463 aa26.11■■□□□ 1.77
ITGA4-202ENST00000339307 DPEP1P16444 411 aa26.11■■□□□ 1.77
ITGA4-202ENST00000339307 N4BP2Q86UW6 1770 aaPredicted RBP26.11■■□□□ 1.77
ITGA4-202ENST00000339307 VIRMAQ69YN4 1812 aaKnown RBP26.1■■□□□ 1.77
ITGA4-202ENST00000339307 TEFQ10587 303 aa26.1■■□□□ 1.77
ITGA4-202ENST00000339307 GAS2L2Q8NHY3 880 aa26.1■■□□□ 1.77
ITGA4-202ENST00000339307 GNAT3A8MTJ3 354 aa26.09■■□□□ 1.77
ITGA4-202ENST00000339307 CYP19A1P11511 503 aaPredicted RBP26.09■■□□□ 1.77
ITGA4-202ENST00000339307 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
ITGA4-202ENST00000339307 C10orf71Q711Q0 1435 aa26.09■■□□□ 1.77
ITGA4-202ENST00000339307 FCHSD2O94868 740 aa26.08■■□□□ 1.77
ITGA4-202ENST00000339307 COL3A1P02461 1466 aaPredicted RBP26.08■■□□□ 1.77
ITGA4-202ENST00000339307 MRC1P22897 1456 aa26.08■■□□□ 1.77
ITGA4-202ENST00000339307 ARHGAP27Q6ZUM4 889 aa26.07■■□□□ 1.76
ITGA4-202ENST00000339307 CANXP27824 592 aaKnown RBP26.06■■□□□ 1.76
ITGA4-202ENST00000339307 KIF13BQ9NQT8 1826 aa26.06■■□□□ 1.76
ITGA4-202ENST00000339307 DDR1Q08345 913 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 NUDCQ9Y266 331 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 ZBTB1Q9Y2K1 713 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 SOS1Q07889 1333 aaPredicted RBP26.05■■□□□ 1.76
ITGA4-202ENST00000339307 PRKAR2BP31323 418 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 VSIG10Q8N0Z9 540 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 IL17REQ8NFR9 667 aa26.05■■□□□ 1.76
ITGA4-202ENST00000339307 KCPQ6ZWJ8 1503 aa26.04■■□□□ 1.76
ITGA4-202ENST00000339307 STARD3NLO95772 234 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms