RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 EHBP1L1Q8N3D4 1523 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 CFAP100Q494V2 611 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 SSBP05455 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
HLCS-201ENST00000336648 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 RAB34Q9BZG1 259 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 FILIP1Q7Z7B0 1213 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
HLCS-201ENST00000336648 KIF5CO60282 957 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 CCDC183Q5T5S1 534 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
HLCS-201ENST00000336648 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
HLCS-201ENST00000336648 CWC27Q6UX04 472 aaKnown RBP15.22■□□□□ 0.03
HLCS-201ENST00000336648 KIF18AQ8NI77 898 aa15.22■□□□□ 0.03
HLCS-201ENST00000336648 CABP1Q9NZU7 370 aa15.22■□□□□ 0.03
HLCS-201ENST00000336648 LRP2BPQ9P2M1 347 aa15.22■□□□□ 0.03
HLCS-201ENST00000336648 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
HLCS-201ENST00000336648 FAM177A1Q8N128 213 aaPredicted RBP15.22■□□□□ 0.03
HLCS-201ENST00000336648 PYM1Q9BRP8 204 aaKnown RBP15.22■□□□□ 0.03
HLCS-201ENST00000336648 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
HLCS-201ENST00000336648 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
HLCS-201ENST00000336648 SLC12A5Q9H2X9 1139 aa15.21■□□□□ 0.03
HLCS-201ENST00000336648 KCNH5Q8NCM2 988 aa15.21■□□□□ 0.03
HLCS-201ENST00000336648 IBSPP21815 317 aaPredicted RBP15.21■□□□□ 0.03
HLCS-201ENST00000336648 STARD3NLO95772 234 aa15.21■□□□□ 0.02
HLCS-201ENST00000336648 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.02
HLCS-201ENST00000336648 CFAP57Q96MR6 1250 aa15.21■□□□□ 0.02
HLCS-201ENST00000336648 STRN4Q9NRL3 753 aa15.21■□□□□ 0.02
HLCS-201ENST00000336648 USO1O60763 962 aaKnown RBP15.2■□□□□ 0.02
HLCS-201ENST00000336648 CASTP20810 708 aaKnown RBP15.2■□□□□ 0.02
HLCS-201ENST00000336648 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 GOLGA6L9A6NEM1 432 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
HLCS-201ENST00000336648 MYZAPP0CAP1 466 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 PPP4R3AQ6IN85 833 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 IPO4Q8TEX9 1081 aaKnown RBP15.2■□□□□ 0.02
HLCS-201ENST00000336648 GNAT3A8MTJ3 354 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 CAVIN2O95810 425 aa15.2■□□□□ 0.02
HLCS-201ENST00000336648 DHX29Q7Z478 1369 aaKnown RBP15.2■□□□□ 0.02
HLCS-201ENST00000336648 MX1P20591 662 aa15.19■□□□□ 0.02
HLCS-201ENST00000336648 LARP1Q6PKG0 1096 aaKnown RBP15.19■□□□□ 0.02
HLCS-201ENST00000336648 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLCS-201ENST00000336648 GSDMDP57764 484 aa15.19■□□□□ 0.02
HLCS-201ENST00000336648 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
HLCS-201ENST00000336648 SMC1AQ14683 1233 aaKnown RBP15.19■□□□□ 0.02
HLCS-201ENST00000336648 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
HLCS-201ENST00000336648 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
HLCS-201ENST00000336648 CASQ1P31415 396 aa15.19■□□□□ 0.02
HLCS-201ENST00000336648 PAFAH1B1P43034 410 aa15.19■□□□□ 0.02
HLCS-201ENST00000336648 MATR3P43243 847 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLCS-201ENST00000336648 IFIT1P09914 478 aaKnown RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 TMEM266Q2M3C6 531 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 EHMT1Q9H9B1 1298 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 MYL6BP14649 208 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 MCM5P33992 734 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 DDX19AQ9NUU7 478 aaKnown RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 AKNAQ7Z591 1439 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 RNF187Q5TA31 235 aaPredicted RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
HLCS-201ENST00000336648 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
HLCS-201ENST00000336648 CACNA2D4Q7Z3S7 1137 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 CBX1P83916 185 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 CTCFLQ8NI51 663 aaPredicted RBP15.17■□□□□ 0.02
HLCS-201ENST00000336648 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 IDH1O75874 414 aaKnown RBP15.17■□□□□ 0.02
HLCS-201ENST00000336648 YEATS4O95619 227 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
HLCS-201ENST00000336648 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
HLCS-201ENST00000336648 POGZQ7Z3K3 1410 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
HLCS-201ENST00000336648 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
HLCS-201ENST00000336648 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
HLCS-201ENST00000336648 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
HLCS-201ENST00000336648 METTL24Q5JXM2 366 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 CCDC150Q8NCX0 1101 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
HLCS-201ENST00000336648 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 ANAPC15P60006 121 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 GIGYF2Q6Y7W6 1299 aaKnown RBP15.15■□□□□ 0.02
HLCS-201ENST00000336648 SYCE3A1L190 88 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 CETN1Q12798 172 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 ANKLE2Q86XL3 938 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
HLCS-201ENST00000336648 IL1RAPL2Q9NP60 686 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms