RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 NFAT5O94916 1531 aa9.79□□□□□ -0.84
KTN1-201ENST00000334975 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.79□□□□□ -0.84
KTN1-201ENST00000334975 KIF3CO14782 793 aa9.79□□□□□ -0.84
KTN1-201ENST00000334975 AATKQ6ZMQ8 1374 aa9.78□□□□□ -0.84
KTN1-201ENST00000334975 SMYD5Q6GMV2 418 aa9.78□□□□□ -0.84
KTN1-201ENST00000334975 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
KTN1-201ENST00000334975 NRAPQ86VF7 1730 aa9.78□□□□□ -0.84
KTN1-201ENST00000334975 A0A0G2JS52 829 aa9.78□□□□□ -0.84
KTN1-201ENST00000334975 IL27Q8NEV9 243 aa9.78□□□□□ -0.84
KTN1-201ENST00000334975 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.84
KTN1-201ENST00000334975 ZMYND10O75800 440 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 TNNT2P45379 298 aaPredicted RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 CNGB1Q14028 1251 aaPredicted RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 PLPP6Q8IY26 295 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 USP54Q70EL1 1684 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 RGS12O14924 1447 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 GLI3P10071 1580 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 TMEM92Q6UXU6 159 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 SPATA31A5Q5VU36 1347 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 SPATA31A7Q8IWB4 1347 aa9.77□□□□□ -0.85
KTN1-201ENST00000334975 COL5A2P05997 1499 aaPredicted RBP9.77□□□□□ -0.85
KTN1-201ENST00000334975 CSB-PGBD3P0DP91 1061 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 PDE4CQ08493 712 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 PDIA6Q15084 440 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 LTN1O94822 1766 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 MAP3K19Q56UN5 1328 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 RGPD5Q99666 1765 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 PLCG2P16885 1265 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 AMPHP49418 695 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 MFAP1P55081 439 aaKnown RBP9.76□□□□□ -0.85
KTN1-201ENST00000334975 TOM1L2Q6ZVM7 507 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
KTN1-201ENST00000334975 COL18A1P39060 1754 aa9.75□□□□□ -0.85
KTN1-201ENST00000334975 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
KTN1-201ENST00000334975 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
KTN1-201ENST00000334975 LTV1Q96GA3 475 aaPredicted RBP9.75□□□□□ -0.85
KTN1-201ENST00000334975 SOCS7O14512 581 aa9.75□□□□□ -0.85
KTN1-201ENST00000334975 CDK12Q9NYV4 1490 aaPredicted RBP9.74□□□□□ -0.85
KTN1-201ENST00000334975 EP400Q96L91 3159 aa9.74□□□□□ -0.85
KTN1-201ENST00000334975 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
KTN1-201ENST00000334975 IP6K1Q92551 441 aa9.74□□□□□ -0.85
KTN1-201ENST00000334975 WDR17Q8IZU2 1322 aa9.74□□□□□ -0.85
KTN1-201ENST00000334975 CRB1P82279 1406 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
KTN1-201ENST00000334975 HOXC9P31274 260 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
KTN1-201ENST00000334975 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 NLRP2Q9NX02 1062 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 ERBB3P21860 1342 aa9.73□□□□□ -0.85
KTN1-201ENST00000334975 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
KTN1-201ENST00000334975 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
KTN1-201ENST00000334975 G3V3G9 751 aa9.72□□□□□ -0.85
KTN1-201ENST00000334975 FAM182BQ5T319 152 aa9.71□□□□□ -0.85
KTN1-201ENST00000334975 FAM177A1Q8N128 213 aaPredicted RBP9.71□□□□□ -0.85
KTN1-201ENST00000334975 BLMP54132 1417 aaPredicted RBP9.71□□□□□ -0.86
KTN1-201ENST00000334975 NSD2O96028 1365 aa9.71□□□□□ -0.86
KTN1-201ENST00000334975 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
KTN1-201ENST00000334975 GPIHBP1Q8IV16 184 aa9.71□□□□□ -0.86
KTN1-201ENST00000334975 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
KTN1-201ENST00000334975 POLKQ9UBT6 870 aa9.71□□□□□ -0.86
KTN1-201ENST00000334975 ABCC6O95255 1503 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 BRWD3Q6RI45 1802 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
KTN1-201ENST00000334975 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
KTN1-201ENST00000334975 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
KTN1-201ENST00000334975 SEC24BO95487 1268 aa9.7□□□□□ -0.86
KTN1-201ENST00000334975 GZF1Q9H116 711 aaPredicted RBP9.7□□□□□ -0.86
KTN1-201ENST00000334975 PEAK1Q9H792 1746 aa9.69□□□□□ -0.86
KTN1-201ENST00000334975 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
KTN1-201ENST00000334975 FLT4P35916 1363 aa9.69□□□□□ -0.86
KTN1-201ENST00000334975 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
KTN1-201ENST00000334975 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
KTN1-201ENST00000334975 PDE3BQ13370 1112 aa9.68□□□□□ -0.86
KTN1-201ENST00000334975 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
KTN1-201ENST00000334975 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
KTN1-201ENST00000334975 INSRP06213 1382 aa9.68□□□□□ -0.86
KTN1-201ENST00000334975 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
KTN1-201ENST00000334975 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
KTN1-201ENST00000334975 DDB1Q16531 1140 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 RGPD2P0DJD1 1756 aa9.67□□□□□ -0.86
KTN1-201ENST00000334975 IL2RBP14784 551 aa9.66□□□□□ -0.86
KTN1-201ENST00000334975 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
KTN1-201ENST00000334975 GRXCR2A6NFK2 248 aa9.65□□□□□ -0.86
KTN1-201ENST00000334975 MTHFSP49914 203 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms