RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 KCNQ3O43525 872 aa23.39■■□□□ 1.33
NELFA-201ENST00000333877 PRDM11Q9NQV5 511 aa23.39■■□□□ 1.33
NELFA-201ENST00000333877 MEGF6O75095 1541 aa23.38■■□□□ 1.33
NELFA-201ENST00000333877 HDGFL1Q5TGJ6 251 aa23.38■■□□□ 1.33
NELFA-201ENST00000333877 CACNA1FO60840 1977 aa23.38■■□□□ 1.33
NELFA-201ENST00000333877 F6X3S4 739 aa23.37■■□□□ 1.33
NELFA-201ENST00000333877 FLIIQ13045 1269 aa23.37■■□□□ 1.33
NELFA-201ENST00000333877 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
NELFA-201ENST00000333877 NHSL1Q5SYE7 1610 aa23.37■■□□□ 1.33
NELFA-201ENST00000333877 SLC4A10Q6U841 1118 aa23.36■■□□□ 1.33
NELFA-201ENST00000333877 SIRT2Q8IXJ6 389 aa23.36■■□□□ 1.33
NELFA-201ENST00000333877 ADAMTS7Q9UKP4 1686 aa23.35■■□□□ 1.33
NELFA-201ENST00000333877 FKBP5Q13451 457 aaPredicted RBP23.35■■□□□ 1.33
NELFA-201ENST00000333877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.35■■□□□ 1.33
NELFA-201ENST00000333877 HOXB7P09629 217 aa23.35■■□□□ 1.33
NELFA-201ENST00000333877 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
NELFA-201ENST00000333877 EIF2S2P20042 333 aaKnown RBP23.34■■□□□ 1.33
NELFA-201ENST00000333877 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
NELFA-201ENST00000333877 SIPA1L3O60292 1781 aaPredicted RBP23.34■■□□□ 1.33
NELFA-201ENST00000333877 NUCB1Q02818 461 aa23.33■■□□□ 1.33
NELFA-201ENST00000333877 GCC1Q96CN9 775 aa23.33■■□□□ 1.33
NELFA-201ENST00000333877 PHKG2P15735 406 aa23.33■■□□□ 1.33
NELFA-201ENST00000333877 MEIS3Q99687 375 aa23.32■■□□□ 1.32
NELFA-201ENST00000333877 IFNL2Q8IZJ0 200 aa23.31■■□□□ 1.32
NELFA-201ENST00000333877 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
NELFA-201ENST00000333877 CHMP4AQ9BY43 222 aa23.31■■□□□ 1.32
NELFA-201ENST00000333877 PLEKHG2Q9H7P9 1386 aa23.31■■□□□ 1.32
NELFA-201ENST00000333877 WDR17Q8IZU2 1322 aa23.31■■□□□ 1.32
NELFA-201ENST00000333877 SCN11AQ9UI33 1791 aa23.31■■□□□ 1.32
NELFA-201ENST00000333877 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
NELFA-201ENST00000333877 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
NELFA-201ENST00000333877 MYT1Q01538 1121 aa23.29■■□□□ 1.32
NELFA-201ENST00000333877 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
NELFA-201ENST00000333877 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
NELFA-201ENST00000333877 TOM1L2Q6ZVM7 507 aa23.29■■□□□ 1.32
NELFA-201ENST00000333877 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
NELFA-201ENST00000333877 ATP10DQ9P241 1426 aa23.29■■□□□ 1.32
NELFA-201ENST00000333877 COL5A2P05997 1499 aaPredicted RBP23.29■■□□□ 1.32
NELFA-201ENST00000333877 ANKRD44Q8N8A2 993 aa23.28■■□□□ 1.32
NELFA-201ENST00000333877 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
NELFA-201ENST00000333877 ANKRD45Q5TZF3 282 aa23.28■■□□□ 1.32
NELFA-201ENST00000333877 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
NELFA-201ENST00000333877 SLC52A2Q9HAB3 445 aa23.28■■□□□ 1.32
NELFA-201ENST00000333877 CYP27B1O15528 508 aa23.27■■□□□ 1.32
NELFA-201ENST00000333877 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.32
NELFA-201ENST00000333877 GIGYF1O75420 1035 aaPredicted RBP23.27■■□□□ 1.31
NELFA-201ENST00000333877 CEP85Q6P2H3 762 aa23.27■■□□□ 1.31
NELFA-201ENST00000333877 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
NELFA-201ENST00000333877 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
NELFA-201ENST00000333877 DCTPP1Q9H773 170 aa23.24■■□□□ 1.31
NELFA-201ENST00000333877 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
NELFA-201ENST00000333877 N4BP2Q86UW6 1770 aaPredicted RBP23.23■■□□□ 1.31
NELFA-201ENST00000333877 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
NELFA-201ENST00000333877 SLC39A6Q13433 755 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 PRAMEF22A3QJZ6 481 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 ANXA1P04083 346 aa23.23■■□□□ 1.31
NELFA-201ENST00000333877 HSP90AB1P08238 724 aaKnown RBP23.23■■□□□ 1.31
NELFA-201ENST00000333877 DBF4Q9UBU7 674 aaPredicted RBP23.23■■□□□ 1.31
NELFA-201ENST00000333877 EVA1CP58658 441 aa23.21■■□□□ 1.31
NELFA-201ENST00000333877 CARD10Q9BWT7 1032 aa23.21■■□□□ 1.31
NELFA-201ENST00000333877 SEC24BO95487 1268 aa23.21■■□□□ 1.31
NELFA-201ENST00000333877 GNAI2P04899 355 aa23.21■■□□□ 1.31
NELFA-201ENST00000333877 GNAI3P08754 354 aa23.2■■□□□ 1.3
NELFA-201ENST00000333877 LARP1Q6PKG0 1096 aaKnown RBP23.2■■□□□ 1.3
NELFA-201ENST00000333877 MRC1P22897 1456 aa23.2■■□□□ 1.3
NELFA-201ENST00000333877 ZCRB1Q8TBF4 217 aaKnown RBP23.2■■□□□ 1.3
NELFA-201ENST00000333877 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.3
NELFA-201ENST00000333877 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
NELFA-201ENST00000333877 ZBTB47Q9UFB7 747 aaPredicted RBP23.19■■□□□ 1.3
NELFA-201ENST00000333877 LTBP4Q8N2S1 1624 aa23.19■■□□□ 1.3
NELFA-201ENST00000333877 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
NELFA-201ENST00000333877 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
NELFA-201ENST00000333877 IL2RBP14784 551 aa23.18■■□□□ 1.3
NELFA-201ENST00000333877 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 HMMRO75330 724 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 PROSER3Q2NL68 480 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 CABP4P57796 275 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 DNAAF4Q8WXU2 420 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 SRCIN1Q9C0H9 1055 aa23.17■■□□□ 1.3
NELFA-201ENST00000333877 USP44Q9H0E7 712 aa23.16■■□□□ 1.3
NELFA-201ENST00000333877 AHDC1Q5TGY3 1603 aaPredicted RBP23.16■■□□□ 1.3
NELFA-201ENST00000333877 TTC5Q8N0Z6 440 aa23.15■■□□□ 1.3
NELFA-201ENST00000333877 ZNF496Q96IT1 587 aaPredicted RBP23.15■■□□□ 1.3
NELFA-201ENST00000333877 C5P01031 1676 aa23.15■■□□□ 1.3
NELFA-201ENST00000333877 ADCY9O60503 1353 aa23.15■■□□□ 1.3
NELFA-201ENST00000333877 DDRGK1Q96HY6 314 aa23.14■■□□□ 1.3
NELFA-201ENST00000333877 HYPKQ9NX55 129 aa23.14■■□□□ 1.3
NELFA-201ENST00000333877 BTG4Q9NY30 223 aa23.14■■□□□ 1.29
NELFA-201ENST00000333877 BEND3Q5T5X7 828 aa23.13■■□□□ 1.29
NELFA-201ENST00000333877 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
NELFA-201ENST00000333877 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
NELFA-201ENST00000333877 LRRFIP2Q9Y608 721 aaKnown RBP23.13■■□□□ 1.29
NELFA-201ENST00000333877 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
NELFA-201ENST00000333877 APBB1O00213 710 aa23.11■■□□□ 1.29
NELFA-201ENST00000333877 ATP8B2P98198 1209 aa23.11■■□□□ 1.29
NELFA-201ENST00000333877 PDIA6Q15084 440 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms