RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
CCDC87-201ENST00000333861 ERICH4A6NGS2 130 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 LTKP29376 864 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 GCC1Q96CN9 775 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 ST18O60284 1047 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.25
CCDC87-201ENST00000333861 KCNJ4P48050 445 aa13.46□□□□□ -0.26
CCDC87-201ENST00000333861 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.26
CCDC87-201ENST00000333861 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.26
CCDC87-201ENST00000333861 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.26
CCDC87-201ENST00000333861 NPHP1O15259 732 aa13.45□□□□□ -0.26
CCDC87-201ENST00000333861 FAM173BQ6P4H8 233 aa13.45□□□□□ -0.26
CCDC87-201ENST00000333861 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
CCDC87-201ENST00000333861 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
CCDC87-201ENST00000333861 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
CCDC87-201ENST00000333861 CDK11BP21127 795 aaKnown RBP13.44□□□□□ -0.26
CCDC87-201ENST00000333861 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
CCDC87-201ENST00000333861 IL1RAPL2Q9NP60 686 aa13.44□□□□□ -0.26
CCDC87-201ENST00000333861 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
CCDC87-201ENST00000333861 CAMK4Q16566 473 aa13.44□□□□□ -0.26
CCDC87-201ENST00000333861 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
CCDC87-201ENST00000333861 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC87-201ENST00000333861 C3P01024 1663 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
CCDC87-201ENST00000333861 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
CCDC87-201ENST00000333861 G2E3Q7L622 706 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 RIMS1Q86UR5 1692 aaKnown RBP13.43□□□□□ -0.26
CCDC87-201ENST00000333861 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
CCDC87-201ENST00000333861 A0A087WWV3 80 aa13.42□□□□□ -0.26
CCDC87-201ENST00000333861 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
CCDC87-201ENST00000333861 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
CCDC87-201ENST00000333861 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
CCDC87-201ENST00000333861 KCNF1Q9H3M0 494 aa13.42□□□□□ -0.26
CCDC87-201ENST00000333861 NME9Q86XW9 330 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 C16orf45Q96MC5 204 aaPredicted RBP13.41□□□□□ -0.26
CCDC87-201ENST00000333861 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 LRMPQ12912 555 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 ZNF592Q92610 1267 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 ST7Q9NRC1 585 aa13.41□□□□□ -0.26
CCDC87-201ENST00000333861 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC87-201ENST00000333861 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
CCDC87-201ENST00000333861 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
CCDC87-201ENST00000333861 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 TCHHQ07283 1943 aa13.4□□□□□ -0.26
CCDC87-201ENST00000333861 MBD3O95983 291 aa13.4□□□□□ -0.27
CCDC87-201ENST00000333861 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.27
CCDC87-201ENST00000333861 NRBP1Q9UHY1 535 aa13.4□□□□□ -0.27
CCDC87-201ENST00000333861 METP08581 1390 aa13.4□□□□□ -0.27
CCDC87-201ENST00000333861 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 MSH6P52701 1360 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 ERC2O15083 957 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 FOXO3O43524 673 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
CCDC87-201ENST00000333861 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
CCDC87-201ENST00000333861 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
CCDC87-201ENST00000333861 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
CCDC87-201ENST00000333861 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 FOSBP53539 338 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
CCDC87-201ENST00000333861 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
CCDC87-201ENST00000333861 PTGS1P23219 599 aa13.37□□□□□ -0.27
CCDC87-201ENST00000333861 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
CCDC87-201ENST00000333861 LARGE1O95461 756 aa13.37□□□□□ -0.27
CCDC87-201ENST00000333861 BRD1O95696 1058 aa13.37□□□□□ -0.27
CCDC87-201ENST00000333861 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
CCDC87-201ENST00000333861 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
CCDC87-201ENST00000333861 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 UBR1Q8IWV7 1749 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 PDE1AP54750 535 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 ABCC4O15439 1325 aa13.36□□□□□ -0.27
CCDC87-201ENST00000333861 PTPRMP28827 1452 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 CT47B1P0C2W7 299 aaPredicted RBP13.35□□□□□ -0.27
CCDC87-201ENST00000333861 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
CCDC87-201ENST00000333861 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
CCDC87-201ENST00000333861 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
CCDC87-201ENST00000333861 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms