RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NKX1-1Q15270 411 aaPredicted RBP29.92■■■□□ 2.38
TSEN54-201ENST00000333213 ALDH1L2Q3SY69 923 aa29.92■■■□□ 2.38
TSEN54-201ENST00000333213 SLC52A2Q9HAB3 445 aa29.92■■■□□ 2.38
TSEN54-201ENST00000333213 THRAP3Q9Y2W1 955 aaKnown RBP29.92■■■□□ 2.38
TSEN54-201ENST00000333213 HSP90AB1P08238 724 aaKnown RBP29.92■■■□□ 2.38
TSEN54-201ENST00000333213 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.91■■■□□ 2.38
TSEN54-201ENST00000333213 NFATC2IPQ8NCF5 419 aa29.91■■■□□ 2.38
TSEN54-201ENST00000333213 FRAT1Q92837 279 aaPredicted RBP29.91■■■□□ 2.38
TSEN54-201ENST00000333213 MRC1P22897 1456 aa29.91■■■□□ 2.38
TSEN54-201ENST00000333213 TCERG1O14776 1098 aaKnown RBP29.9■■■□□ 2.38
TSEN54-201ENST00000333213 ERICH6BQ5W0A0 696 aa29.9■■■□□ 2.38
TSEN54-201ENST00000333213 TNNQ9UQP3 1299 aa29.89■■■□□ 2.38
TSEN54-201ENST00000333213 CCDC9Q9Y3X0 531 aaKnown RBP29.89■■■□□ 2.38
TSEN54-201ENST00000333213 EIF4A1P60842 406 aaKnown RBP29.88■■■□□ 2.37
TSEN54-201ENST00000333213 VPS72Q15906 364 aa29.88■■■□□ 2.37
TSEN54-201ENST00000333213 USP21Q9UK80 565 aa29.88■■■□□ 2.37
TSEN54-201ENST00000333213 EXOC6Q8TAG9 804 aa29.87■■■□□ 2.37
TSEN54-201ENST00000333213 BRPF1P55201 1214 aaPredicted RBP29.86■■■□□ 2.37
TSEN54-201ENST00000333213 BARGINQ6ZT62 677 aa29.86■■■□□ 2.37
TSEN54-201ENST00000333213 MRPL50Q8N5N7 158 aaKnown RBP29.86■■■□□ 2.37
TSEN54-201ENST00000333213 MEX3CQ5U5Q3 659 aaKnown RBP29.86■■■□□ 2.37
TSEN54-201ENST00000333213 EXOC5O00471 708 aa29.85■■■□□ 2.37
TSEN54-201ENST00000333213 CRBNQ96SW2 442 aa29.85■■■□□ 2.37
TSEN54-201ENST00000333213 CDCA7Q9BWT1 371 aaPredicted RBP29.84■■■□□ 2.37
TSEN54-201ENST00000333213 NOB1Q9ULX3 412 aaKnown RBP29.84■■■□□ 2.37
TSEN54-201ENST00000333213 TNS2Q63HR2 1409 aa29.84■■■□□ 2.37
TSEN54-201ENST00000333213 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.84■■■□□ 2.37
TSEN54-201ENST00000333213 SLC39A6Q13433 755 aa29.84■■■□□ 2.37
TSEN54-201ENST00000333213 TOGARAM1Q9Y4F4 1720 aa29.83■■■□□ 2.37
TSEN54-201ENST00000333213 CANXP27824 592 aaKnown RBP29.83■■■□□ 2.37
TSEN54-201ENST00000333213 RLBP1P12271 317 aa29.82■■■□□ 2.36
TSEN54-201ENST00000333213 CABP4P57796 275 aa29.82■■■□□ 2.36
TSEN54-201ENST00000333213 PDE3AQ14432 1141 aa29.82■■■□□ 2.36
TSEN54-201ENST00000333213 PANK1Q8TE04 598 aa29.82■■■□□ 2.36
TSEN54-201ENST00000333213 AFF2P51816 1311 aa29.81■■■□□ 2.36
TSEN54-201ENST00000333213 ZNF790Q6PG37 636 aa29.81■■■□□ 2.36
TSEN54-201ENST00000333213 HEG1Q9ULI3 1381 aa29.81■■■□□ 2.36
TSEN54-201ENST00000333213 ERVV-2B6SEH9 535 aa29.81■■■□□ 2.36
TSEN54-201ENST00000333213 ZKSCAN2Q63HK3 967 aa29.81■■■□□ 2.36
TSEN54-201ENST00000333213 TRIM27P14373 513 aa29.8■■■□□ 2.36
TSEN54-201ENST00000333213 FAM98CQ17RN3 349 aaKnown RBP29.8■■■□□ 2.36
TSEN54-201ENST00000333213 DDB1Q16531 1140 aa29.79■■■□□ 2.36
TSEN54-201ENST00000333213 KIF16BQ96L93 1317 aa29.79■■■□□ 2.36
TSEN54-201ENST00000333213 CLUAP1Q96AJ1 413 aa29.79■■■□□ 2.36
TSEN54-201ENST00000333213 ATF7IPQ6VMQ6 1270 aa29.77■■■□□ 2.36
TSEN54-201ENST00000333213 SOS1Q07889 1333 aaPredicted RBP29.77■■■□□ 2.36
TSEN54-201ENST00000333213 PRAMEF22A3QJZ6 481 aa29.76■■■□□ 2.35
TSEN54-201ENST00000333213 PPP4R2Q9NY27 417 aa29.76■■■□□ 2.35
TSEN54-201ENST00000333213 GIGYF1O75420 1035 aaPredicted RBP29.75■■■□□ 2.35
TSEN54-201ENST00000333213 NECTIN2Q92692 538 aa29.75■■■□□ 2.35
TSEN54-201ENST00000333213 MARCH10Q8NA82 808 aaPredicted RBP29.74■■■□□ 2.35
TSEN54-201ENST00000333213 COG6Q9Y2V7 657 aa29.74■■■□□ 2.35
TSEN54-201ENST00000333213 GLI3P10071 1580 aa29.74■■■□□ 2.35
TSEN54-201ENST00000333213 SLC4A2P04920 1241 aa29.73■■■□□ 2.35
TSEN54-201ENST00000333213 HOXB7P09629 217 aa29.73■■■□□ 2.35
TSEN54-201ENST00000333213 ZNF496Q96IT1 587 aaPredicted RBP29.73■■■□□ 2.35
TSEN54-201ENST00000333213 ANP32EQ9BTT0 268 aa29.73■■■□□ 2.35
TSEN54-201ENST00000333213 DZIP1LQ8IYY4 767 aaKnown RBP29.72■■■□□ 2.35
TSEN54-201ENST00000333213 IPO8O15397 1037 aaKnown RBP29.71■■■□□ 2.35
TSEN54-201ENST00000333213 HDGFL1Q5TGJ6 251 aa29.71■■■□□ 2.35
TSEN54-201ENST00000333213 CCDC30Q5VVM6 783 aa29.71■■■□□ 2.35
TSEN54-201ENST00000333213 ARHGAP45Q92619 1136 aa29.71■■■□□ 2.35
TSEN54-201ENST00000333213 GJD4Q96KN9 370 aaPredicted RBP29.71■■■□□ 2.35
TSEN54-201ENST00000333213 ATRNO75882 1429 aa29.71■■■□□ 2.35
TSEN54-201ENST00000333213 G2E3Q7L622 706 aa29.71■■■□□ 2.35
TSEN54-201ENST00000333213 EIF2S2P20042 333 aaKnown RBP29.7■■■□□ 2.34
TSEN54-201ENST00000333213 B4GALNT3Q6L9W6 998 aa29.7■■■□□ 2.34
TSEN54-201ENST00000333213 PAPPAQ13219 1627 aa29.69■■■□□ 2.34
TSEN54-201ENST00000333213 ITGB4P16144 1822 aa29.69■■■□□ 2.34
TSEN54-201ENST00000333213 TTC5Q8N0Z6 440 aa29.69■■■□□ 2.34
TSEN54-201ENST00000333213 PIGBQ92521 554 aa29.69■■■□□ 2.34
TSEN54-201ENST00000333213 TMOD3Q9NYL9 352 aa29.68■■■□□ 2.34
TSEN54-201ENST00000333213 THSD7AQ9UPZ6 1657 aa29.68■■■□□ 2.34
TSEN54-201ENST00000333213 FTSJ3Q8IY81 847 aaKnown RBP29.67■■■□□ 2.34
TSEN54-201ENST00000333213 C5P01031 1676 aa29.67■■■□□ 2.34
TSEN54-201ENST00000333213 RGS12O14924 1447 aa29.67■■■□□ 2.34
TSEN54-201ENST00000333213 TRPC5Q9UL62 973 aaPredicted RBP29.67■■■□□ 2.34
TSEN54-201ENST00000333213 STK31Q9BXU1 1019 aa29.66■■■□□ 2.34
TSEN54-201ENST00000333213 RBM19Q9Y4C8 960 aaKnown RBP29.66■■■□□ 2.34
TSEN54-201ENST00000333213 UBR2Q8IWV8 1755 aa29.66■■■□□ 2.34
TSEN54-201ENST00000333213 KCPQ6ZWJ8 1503 aa29.65■■■□□ 2.34
TSEN54-201ENST00000333213 TMEM57Q8N5G2 664 aa29.65■■■□□ 2.34
TSEN54-201ENST00000333213 BCL9O00512 1426 aa29.65■■■□□ 2.34
TSEN54-201ENST00000333213 DOT1LQ8TEK3 1739 aa29.65■■■□□ 2.34
TSEN54-201ENST00000333213 MVPQ14764 893 aaKnown RBP29.65■■■□□ 2.34
TSEN54-201ENST00000333213 FMNL2Q96PY5 1086 aa29.65■■■□□ 2.34
TSEN54-201ENST00000333213 CHPF2Q9P2E5 772 aa29.64■■■□□ 2.34
TSEN54-201ENST00000333213 MS4A1P11836 297 aa29.63■■■□□ 2.33
TSEN54-201ENST00000333213 ASAP1Q9ULH1 1129 aa29.63■■■□□ 2.33
TSEN54-201ENST00000333213 ABCC4O15439 1325 aa29.63■■■□□ 2.33
TSEN54-201ENST00000333213 PRIM1P49642 420 aaKnown RBP29.63■■■□□ 2.33
TSEN54-201ENST00000333213 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
TSEN54-201ENST00000333213 ONECUT3O60422 494 aaPredicted RBP29.62■■■□□ 2.33
TSEN54-201ENST00000333213 PTPRCP08575 1304 aa29.62■■■□□ 2.33
TSEN54-201ENST00000333213 ATG3Q9NT62 314 aa29.61■■■□□ 2.33
TSEN54-201ENST00000333213 USP16Q9Y5T5 823 aa29.61■■■□□ 2.33
TSEN54-201ENST00000333213 A0A0G2JS52 829 aa29.61■■■□□ 2.33
TSEN54-201ENST00000333213 ANXA1P04083 346 aa29.61■■■□□ 2.33
TSEN54-201ENST00000333213 SNRPA1P09661 255 aaKnown RBP29.61■■■□□ 2.33
TSEN54-201ENST00000333213 FBXO41Q8TF61 875 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 238.1 ms