RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NUCB1Q02818 461 aa17.56■□□□□ 0.4
TRAIP-201ENST00000331456 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-201ENST00000331456 PLEKHG2Q9H7P9 1386 aa17.56■□□□□ 0.4
TRAIP-201ENST00000331456 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
TRAIP-201ENST00000331456 G2E3Q7L622 706 aa17.55■□□□□ 0.4
TRAIP-201ENST00000331456 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
TRAIP-201ENST00000331456 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
TRAIP-201ENST00000331456 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
TRAIP-201ENST00000331456 FLIIQ13045 1269 aa17.55■□□□□ 0.4
TRAIP-201ENST00000331456 HDGFL1Q5TGJ6 251 aa17.55■□□□□ 0.4
TRAIP-201ENST00000331456 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
TRAIP-201ENST00000331456 CACNA1FO60840 1977 aa17.54■□□□□ 0.4
TRAIP-201ENST00000331456 CHRNA2Q15822 529 aa17.54■□□□□ 0.4
TRAIP-201ENST00000331456 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
TRAIP-201ENST00000331456 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
TRAIP-201ENST00000331456 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
TRAIP-201ENST00000331456 FKBP5Q13451 457 aaPredicted RBP17.54■□□□□ 0.4
TRAIP-201ENST00000331456 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
TRAIP-201ENST00000331456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRAIP-201ENST00000331456 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
TRAIP-201ENST00000331456 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
TRAIP-201ENST00000331456 NECTIN2Q92692 538 aa17.53■□□□□ 0.4
TRAIP-201ENST00000331456 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.39
TRAIP-201ENST00000331456 F6X3S4 739 aa17.51■□□□□ 0.39
TRAIP-201ENST00000331456 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
TRAIP-201ENST00000331456 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
TRAIP-201ENST00000331456 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
TRAIP-201ENST00000331456 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
TRAIP-201ENST00000331456 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
TRAIP-201ENST00000331456 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
TRAIP-201ENST00000331456 MEIS3Q99687 375 aa17.49■□□□□ 0.39
TRAIP-201ENST00000331456 PXDNLA1KZ92 1463 aa17.49■□□□□ 0.39
TRAIP-201ENST00000331456 KCNQ3O43525 872 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 PHKG2P15735 406 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 CEP85Q6P2H3 762 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
TRAIP-201ENST00000331456 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
TRAIP-201ENST00000331456 HMMRO75330 724 aa17.47■□□□□ 0.39
TRAIP-201ENST00000331456 GNAI3P08754 354 aa17.47■□□□□ 0.39
TRAIP-201ENST00000331456 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
TRAIP-201ENST00000331456 SIPA1L3O60292 1781 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-201ENST00000331456 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
TRAIP-201ENST00000331456 NHSL1Q5SYE7 1610 aa17.46■□□□□ 0.39
TRAIP-201ENST00000331456 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
TRAIP-201ENST00000331456 GNAI2P04899 355 aa17.45■□□□□ 0.38
TRAIP-201ENST00000331456 SLC52A2Q9HAB3 445 aa17.45■□□□□ 0.38
TRAIP-201ENST00000331456 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
TRAIP-201ENST00000331456 DBF4Q9UBU7 674 aaPredicted RBP17.45■□□□□ 0.38
TRAIP-201ENST00000331456 N4BP2Q86UW6 1770 aaPredicted RBP17.44■□□□□ 0.38
TRAIP-201ENST00000331456 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
TRAIP-201ENST00000331456 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
TRAIP-201ENST00000331456 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
TRAIP-201ENST00000331456 PHAXQ9H814 394 aaKnown RBP17.44■□□□□ 0.38
TRAIP-201ENST00000331456 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
TRAIP-201ENST00000331456 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
TRAIP-201ENST00000331456 KDM6AO15550 1401 aaPredicted RBP17.44■□□□□ 0.38
TRAIP-201ENST00000331456 TOM1L2Q6ZVM7 507 aa17.43■□□□□ 0.38
TRAIP-201ENST00000331456 ABCA3Q99758 1704 aa17.43■□□□□ 0.38
TRAIP-201ENST00000331456 DAXXQ9UER7 740 aaPredicted RBP17.42■□□□□ 0.38
TRAIP-201ENST00000331456 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
TRAIP-201ENST00000331456 SEC24BO95487 1268 aa17.42■□□□□ 0.38
TRAIP-201ENST00000331456 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
TRAIP-201ENST00000331456 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
TRAIP-201ENST00000331456 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
TRAIP-201ENST00000331456 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
TRAIP-201ENST00000331456 CYP27B1O15528 508 aa17.4■□□□□ 0.38
TRAIP-201ENST00000331456 DNAAF4Q8WXU2 420 aa17.4■□□□□ 0.38
TRAIP-201ENST00000331456 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
TRAIP-201ENST00000331456 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
TRAIP-201ENST00000331456 MRC1P22897 1456 aa17.39■□□□□ 0.38
TRAIP-201ENST00000331456 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-201ENST00000331456 EVA1CP58658 441 aa17.39■□□□□ 0.37
TRAIP-201ENST00000331456 CARD10Q9BWT7 1032 aa17.39■□□□□ 0.37
TRAIP-201ENST00000331456 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
TRAIP-201ENST00000331456 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
TRAIP-201ENST00000331456 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
TRAIP-201ENST00000331456 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 PI4KAP2A4QPH2 592 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 CABP4P57796 275 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 PI4KAP1Q8N8J0 262 aa17.38■□□□□ 0.37
TRAIP-201ENST00000331456 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
TRAIP-201ENST00000331456 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
TRAIP-201ENST00000331456 ANXA1P04083 346 aa17.37■□□□□ 0.37
TRAIP-201ENST00000331456 IL2RBP14784 551 aa17.37■□□□□ 0.37
TRAIP-201ENST00000331456 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
TRAIP-201ENST00000331456 DDX21Q9NR30 783 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAIP-201ENST00000331456 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
TRAIP-201ENST00000331456 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
TRAIP-201ENST00000331456 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
TRAIP-201ENST00000331456 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
TRAIP-201ENST00000331456 KSR2Q6VAB6 950 aa17.35■□□□□ 0.37
TRAIP-201ENST00000331456 PLEKHM2Q8IWE5 1019 aa17.35■□□□□ 0.37
TRAIP-201ENST00000331456 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
TRAIP-201ENST00000331456 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
TRAIP-201ENST00000331456 ADCY9O60503 1353 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms