RNA–Protein interactions for RNA: ENST00000328252.3

PAPPA-201, Transcript of pappalysin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAPPA, Length 10,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPPA-201ENST00000328252 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
PAPPA-201ENST00000328252 RAB34Q9BZG1 259 aa16.12■□□□□ 0.17
PAPPA-201ENST00000328252 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
PAPPA-201ENST00000328252 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
PAPPA-201ENST00000328252 SREK1Q8WXA9 508 aaKnown RBP16.11■□□□□ 0.17
PAPPA-201ENST00000328252 IKBKGQ9Y6K9 419 aa16.11■□□□□ 0.17
PAPPA-201ENST00000328252 TMCO5BA8MYB1 307 aa16.11■□□□□ 0.17
PAPPA-201ENST00000328252 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
PAPPA-201ENST00000328252 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
PAPPA-201ENST00000328252 PPP1R14CQ8TAE6 165 aa16.11■□□□□ 0.17
PAPPA-201ENST00000328252 ALS2CR12Q96Q35 445 aa16.11■□□□□ 0.17
PAPPA-201ENST00000328252 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
PAPPA-201ENST00000328252 SYCE3A1L190 88 aa16.1■□□□□ 0.17
PAPPA-201ENST00000328252 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
PAPPA-201ENST00000328252 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
PAPPA-201ENST00000328252 CETN1Q12798 172 aa16.1■□□□□ 0.17
PAPPA-201ENST00000328252 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
PAPPA-201ENST00000328252 TCP11L2Q8N4U5 519 aa16.1■□□□□ 0.17
PAPPA-201ENST00000328252 CUX1P39880 1505 aa16.1■□□□□ 0.17
PAPPA-201ENST00000328252 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
PAPPA-201ENST00000328252 DDX54Q8TDD1 881 aaKnown RBP16.1■□□□□ 0.17
PAPPA-201ENST00000328252 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
PAPPA-201ENST00000328252 IPO4Q8TEX9 1081 aaKnown RBP16.09■□□□□ 0.17
PAPPA-201ENST00000328252 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 IL27Q8NEV9 243 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 TDRD12Q587J7 1177 aaKnown RBP16.09■□□□□ 0.17
PAPPA-201ENST00000328252 CUL5Q93034 780 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 CRACR2BQ8N4Y2 399 aaPredicted RBP16.09■□□□□ 0.17
PAPPA-201ENST00000328252 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 ESPNB1AK53 854 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 PHAXQ9H814 394 aaKnown RBP16.09■□□□□ 0.17
PAPPA-201ENST00000328252 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
PAPPA-201ENST00000328252 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.17
PAPPA-201ENST00000328252 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
PAPPA-201ENST00000328252 SRGAP3O43295 1099 aa16.08■□□□□ 0.16
PAPPA-201ENST00000328252 SPG7Q9UQ90 795 aa16.08■□□□□ 0.16
PAPPA-201ENST00000328252 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
PAPPA-201ENST00000328252 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
PAPPA-201ENST00000328252 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
PAPPA-201ENST00000328252 LMAN1P49257 510 aa16.08■□□□□ 0.16
PAPPA-201ENST00000328252 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
PAPPA-201ENST00000328252 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
PAPPA-201ENST00000328252 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 CGNQ9P2M7 1197 aaKnown RBP16.07■□□□□ 0.16
PAPPA-201ENST00000328252 PRPF4BQ13523 1007 aaKnown RBP16.07■□□□□ 0.16
PAPPA-201ENST00000328252 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 MKNK2Q9HBH9 465 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
PAPPA-201ENST00000328252 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 DAAM2Q86T65 1068 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
PAPPA-201ENST00000328252 CCDC7Q96M83 1385 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 EHMT1Q9H9B1 1298 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 CBX1P83916 185 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 YEATS4O95619 227 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
PAPPA-201ENST00000328252 ARL1P40616 181 aaPredicted RBP16.05■□□□□ 0.16
PAPPA-201ENST00000328252 MAATS1Q7Z4T9 603 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 KIF20AO95235 890 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
PAPPA-201ENST00000328252 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
PAPPA-201ENST00000328252 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 BCAR3O75815 825 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 ACTN2P35609 894 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 CEP112Q8N8E3 955 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
PAPPA-201ENST00000328252 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 CCDC183Q5T5S1 534 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 WDR78Q5VTH9 848 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 WIZO95785 1651 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 TTC16Q8NEE8 873 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
PAPPA-201ENST00000328252 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
PAPPA-201ENST00000328252 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
PAPPA-201ENST00000328252 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
PAPPA-201ENST00000328252 LIG1P18858 919 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 CLGNO14967 610 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 DDX12PQ92771 950 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
PAPPA-201ENST00000328252 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
PAPPA-201ENST00000328252 LRRC45Q96CN5 670 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 TTLL12Q14166 644 aaPredicted RBP16.03■□□□□ 0.16
PAPPA-201ENST00000328252 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
PAPPA-201ENST00000328252 A0A087WZG4 1122 aa16.02■□□□□ 0.16
PAPPA-201ENST00000328252 WDR70Q9NW82 654 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms