RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 EIF4A1P60842 406 aaKnown RBP18.85■□□□□ 0.61
TPM3-205ENST00000328159 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
TPM3-205ENST00000328159 C1orf115Q9H7X2 142 aa18.84■□□□□ 0.61
TPM3-205ENST00000328159 PRDM11Q9NQV5 511 aa18.84■□□□□ 0.61
TPM3-205ENST00000328159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.615e-7■■■□□ 17.6
TPM3-205ENST00000328159 SPG7Q9UQ90 795 aa18.83■□□□□ 0.61
TPM3-205ENST00000328159 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
TPM3-205ENST00000328159 HOXB7P09629 217 aa18.83■□□□□ 0.6
TPM3-205ENST00000328159 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
TPM3-205ENST00000328159 NECTIN2Q92692 538 aa18.83■□□□□ 0.6
TPM3-205ENST00000328159 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
TPM3-205ENST00000328159 KCNQ3O43525 872 aa18.82■□□□□ 0.6
TPM3-205ENST00000328159 HDGFL1Q5TGJ6 251 aa18.82■□□□□ 0.6
TPM3-205ENST00000328159 ANP32AP39687 249 aaKnown RBP18.81■□□□□ 0.6
TPM3-205ENST00000328159 FLIIQ13045 1269 aa18.81■□□□□ 0.6
TPM3-205ENST00000328159 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
TPM3-205ENST00000328159 PHKG2P15735 406 aa18.8■□□□□ 0.6
TPM3-205ENST00000328159 CCT4P50991 539 aaKnown RBP18.8■□□□□ 0.6
TPM3-205ENST00000328159 CHMP4AQ9BY43 222 aa18.8■□□□□ 0.6
TPM3-205ENST00000328159 F6X3S4 739 aa18.79■□□□□ 0.6
TPM3-205ENST00000328159 SIRT2Q8IXJ6 389 aa18.79■□□□□ 0.6
TPM3-205ENST00000328159 N4BP2Q86UW6 1770 aaPredicted RBP18.79■□□□□ 0.6
TPM3-205ENST00000328159 KDM6AO15550 1401 aaPredicted RBP18.79■□□□□ 0.6
TPM3-205ENST00000328159 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
TPM3-205ENST00000328159 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
TPM3-205ENST00000328159 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
TPM3-205ENST00000328159 PARP4Q9UKK3 1724 aaKnown RBP18.78■□□□□ 0.6
TPM3-205ENST00000328159 NUCB1Q02818 461 aa18.78■□□□□ 0.6
TPM3-205ENST00000328159 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
TPM3-205ENST00000328159 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
TPM3-205ENST00000328159 MSH5O43196 834 aa18.77■□□□□ 0.6
TPM3-205ENST00000328159 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
TPM3-205ENST00000328159 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.59
TPM3-205ENST00000328159 HEG1Q9ULI3 1381 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
TPM3-205ENST00000328159 MEIS3Q99687 375 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 ATP10DQ9P241 1426 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 TOM1L2Q6ZVM7 507 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 SLC52A2Q9HAB3 445 aa18.76■□□□□ 0.59
TPM3-205ENST00000328159 PXDNLA1KZ92 1463 aa18.75■□□□□ 0.59
TPM3-205ENST00000328159 CYP27B1O15528 508 aa18.74■□□□□ 0.59
TPM3-205ENST00000328159 CHD1LQ86WJ1 897 aa18.74■□□□□ 0.59
TPM3-205ENST00000328159 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
TPM3-205ENST00000328159 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
TPM3-205ENST00000328159 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
TPM3-205ENST00000328159 MRC1P22897 1456 aa18.74■□□□□ 0.59
TPM3-205ENST00000328159 AHDC1Q5TGY3 1603 aaPredicted RBP18.73■□□□□ 0.59
TPM3-205ENST00000328159 GIGYF1O75420 1035 aaPredicted RBP18.73■□□□□ 0.59
TPM3-205ENST00000328159 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
TPM3-205ENST00000328159 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
TPM3-205ENST00000328159 CHPF2Q9P2E5 772 aa18.73■□□□□ 0.59
TPM3-205ENST00000328159 CEP85Q6P2H3 762 aa18.73■□□□□ 0.59
TPM3-205ENST00000328159 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
TPM3-205ENST00000328159 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
TPM3-205ENST00000328159 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
TPM3-205ENST00000328159 LNPKQ9C0E8 428 aa18.71■□□□□ 0.59
TPM3-205ENST00000328159 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
TPM3-205ENST00000328159 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
TPM3-205ENST00000328159 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
TPM3-205ENST00000328159 DBF4Q9UBU7 674 aaPredicted RBP18.7■□□□□ 0.58
TPM3-205ENST00000328159 EVA1CP58658 441 aa18.7■□□□□ 0.58
TPM3-205ENST00000328159 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
TPM3-205ENST00000328159 STRN4Q9NRL3 753 aa18.7■□□□□ 0.58
TPM3-205ENST00000328159 SLC39A6Q13433 755 aa18.69■□□□□ 0.58
TPM3-205ENST00000328159 LARP1Q6PKG0 1096 aaKnown RBP18.69■□□□□ 0.58
TPM3-205ENST00000328159 PCDH11XQ9BZA7 1347 aa18.69■□□□□ 0.58
TPM3-205ENST00000328159 PCDH11YQ9BZA8 1340 aa18.69■□□□□ 0.58
TPM3-205ENST00000328159 COL22A1Q8NFW1 1626 aaPredicted RBP18.69■□□□□ 0.58
TPM3-205ENST00000328159 C5P01031 1676 aa18.68■□□□□ 0.58
TPM3-205ENST00000328159 GNAI2P04899 355 aa18.68■□□□□ 0.58
TPM3-205ENST00000328159 GNAI3P08754 354 aa18.68■□□□□ 0.58
TPM3-205ENST00000328159 PRAMEF22A3QJZ6 481 aa18.68■□□□□ 0.58
TPM3-205ENST00000328159 IL2RBP14784 551 aa18.68■□□□□ 0.58
TPM3-205ENST00000328159 COL14A1Q05707 1796 aaKnown RBP18.67■□□□□ 0.58
TPM3-205ENST00000328159 ANXA1P04083 346 aa18.67■□□□□ 0.58
TPM3-205ENST00000328159 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
TPM3-205ENST00000328159 HMMRO75330 724 aa18.66■□□□□ 0.58
TPM3-205ENST00000328159 CABP4P57796 275 aa18.66■□□□□ 0.58
TPM3-205ENST00000328159 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
TPM3-205ENST00000328159 ADCY9O60503 1353 aa18.64■□□□□ 0.58
TPM3-205ENST00000328159 TTC5Q8N0Z6 440 aa18.64■□□□□ 0.57
TPM3-205ENST00000328159 USP44Q9H0E7 712 aa18.64■□□□□ 0.57
TPM3-205ENST00000328159 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
TPM3-205ENST00000328159 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
TPM3-205ENST00000328159 SEC24BO95487 1268 aa18.63■□□□□ 0.57
TPM3-205ENST00000328159 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
TPM3-205ENST00000328159 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
TPM3-205ENST00000328159 NKX1-1Q15270 411 aaPredicted RBP18.63■□□□□ 0.57
TPM3-205ENST00000328159 BEND3Q5T5X7 828 aa18.63■□□□□ 0.57
TPM3-205ENST00000328159 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
TPM3-205ENST00000328159 PHLPP1O60346 1717 aa18.62■□□□□ 0.57
TPM3-205ENST00000328159 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
TPM3-205ENST00000328159 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
TPM3-205ENST00000328159 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms