RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 C5P01031 1676 aa19.22■□□□□ 0.67
RPAIN-201ENST00000327154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.22■□□□□ 0.67
RPAIN-201ENST00000327154 MTHFSP49914 203 aa19.22■□□□□ 0.67
RPAIN-201ENST00000327154 CABP4P57796 275 aa19.2■□□□□ 0.66
RPAIN-201ENST00000327154 C1orf141Q5JVX7 400 aa19.2■□□□□ 0.66
RPAIN-201ENST00000327154 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
RPAIN-201ENST00000327154 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
RPAIN-201ENST00000327154 COL24A1Q17RW2 1714 aa19.2■□□□□ 0.66
RPAIN-201ENST00000327154 GNPATO15228 680 aa19.19■□□□□ 0.66
RPAIN-201ENST00000327154 SSFA2P28290 1259 aa19.19■□□□□ 0.66
RPAIN-201ENST00000327154 C4BP0C0L5 1744 aa19.19■□□□□ 0.66
RPAIN-201ENST00000327154 ZNF784Q8NCA9 323 aaPredicted RBP19.18■□□□□ 0.66
RPAIN-201ENST00000327154 SLC4A9Q96Q91 983 aa19.18■□□□□ 0.66
RPAIN-201ENST00000327154 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
RPAIN-201ENST00000327154 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
RPAIN-201ENST00000327154 UTRNP46939 3433 aa19.17■□□□□ 0.66
RPAIN-201ENST00000327154 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
RPAIN-201ENST00000327154 NFATC2IPQ8NCF5 419 aa19.16■□□□□ 0.66
RPAIN-201ENST00000327154 CD2APQ9Y5K6 639 aa19.16■□□□□ 0.66
RPAIN-201ENST00000327154 KDRP35968 1356 aa19.16■□□□□ 0.66
RPAIN-201ENST00000327154 HMOX1P09601 288 aa19.15■□□□□ 0.66
RPAIN-201ENST00000327154 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
RPAIN-201ENST00000327154 YBX3P16989 372 aaKnown RBP eCLIP19.14■□□□□ 0.651e-7■□□□□ 10.3
RPAIN-201ENST00000327154 DIAPH1O60610 1272 aaKnown RBP19.13■□□□□ 0.65
RPAIN-201ENST00000327154 TRAPPC3LQ5T215 181 aa19.13■□□□□ 0.65
RPAIN-201ENST00000327154 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
RPAIN-201ENST00000327154 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
RPAIN-201ENST00000327154 AKAP4Q5JQC9 854 aa19.12■□□□□ 0.65
RPAIN-201ENST00000327154 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
RPAIN-201ENST00000327154 LGR6Q9HBX8 967 aa19.11■□□□□ 0.65
RPAIN-201ENST00000327154 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
RPAIN-201ENST00000327154 UBR3Q6ZT12 1888 aa19.09■□□□□ 0.65
RPAIN-201ENST00000327154 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
RPAIN-201ENST00000327154 CNTNAP4Q9C0A0 1308 aa19.08■□□□□ 0.65
RPAIN-201ENST00000327154 MMP10P09238 476 aa19.08■□□□□ 0.64
RPAIN-201ENST00000327154 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
RPAIN-201ENST00000327154 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
RPAIN-201ENST00000327154 RNMTO43148 476 aaKnown RBP19.07■□□□□ 0.64
RPAIN-201ENST00000327154 ADRA2BP18089 450 aa19.07■□□□□ 0.64
RPAIN-201ENST00000327154 RFC4P35249 363 aa19.07■□□□□ 0.64
RPAIN-201ENST00000327154 NLGN1Q8N2Q7 840 aa19.07■□□□□ 0.64
RPAIN-201ENST00000327154 SLC52A2Q9HAB3 445 aa19.07■□□□□ 0.64
RPAIN-201ENST00000327154 CRKLP46109 303 aaKnown RBP19.06■□□□□ 0.64
RPAIN-201ENST00000327154 WWC3Q9ULE0 1092 aa19.06■□□□□ 0.64
RPAIN-201ENST00000327154 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
RPAIN-201ENST00000327154 GOLGB1Q14789 3259 aaKnown RBP19.05■□□□□ 0.64
RPAIN-201ENST00000327154 GYS1P13807 737 aa19.04■□□□□ 0.64
RPAIN-201ENST00000327154 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
RPAIN-201ENST00000327154 CHD4Q14839 1912 aa19.04■□□□□ 0.64
RPAIN-201ENST00000327154 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
RPAIN-201ENST00000327154 DNAJC10Q8IXB1 793 aa19.02■□□□□ 0.64
RPAIN-201ENST00000327154 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
RPAIN-201ENST00000327154 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
RPAIN-201ENST00000327154 PARP3Q9Y6F1 533 aa19■□□□□ 0.63
RPAIN-201ENST00000327154 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
RPAIN-201ENST00000327154 COL3A1P02461 1466 aaPredicted RBP18.98■□□□□ 0.63
RPAIN-201ENST00000327154 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
RPAIN-201ENST00000327154 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
RPAIN-201ENST00000327154 TGFB2P61812 414 aa18.98■□□□□ 0.63
RPAIN-201ENST00000327154 FKBP8Q14318 412 aa18.98■□□□□ 0.63
RPAIN-201ENST00000327154 CFAP53Q96M91 514 aa18.98■□□□□ 0.63
RPAIN-201ENST00000327154 SCN11AQ9UI33 1791 aa18.97■□□□□ 0.63
RPAIN-201ENST00000327154 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
RPAIN-201ENST00000327154 GAS2L2Q8NHY3 880 aa18.97■□□□□ 0.63
RPAIN-201ENST00000327154 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
RPAIN-201ENST00000327154 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
RPAIN-201ENST00000327154 MYH14Q7Z406 1995 aaKnown RBP18.96■□□□□ 0.63
RPAIN-201ENST00000327154 GNAT3A8MTJ3 354 aa18.96■□□□□ 0.63
RPAIN-201ENST00000327154 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
RPAIN-201ENST00000327154 PPP2R1AP30153 589 aa18.95■□□□□ 0.62
RPAIN-201ENST00000327154 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
RPAIN-201ENST00000327154 MRC1P22897 1456 aa18.95■□□□□ 0.62
RPAIN-201ENST00000327154 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-201ENST00000327154 ZPR1O75312 459 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 GIGYF1O75420 1035 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-201ENST00000327154 DPEP1P16444 411 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 PRKAR2BP31323 418 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 TEFQ10587 303 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 TTC5Q8N0Z6 440 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
RPAIN-201ENST00000327154 SOS1Q07889 1333 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-201ENST00000327154 PXDNLA1KZ92 1463 aa18.93■□□□□ 0.62
RPAIN-201ENST00000327154 DDR1Q08345 913 aa18.93■□□□□ 0.62
RPAIN-201ENST00000327154 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
RPAIN-201ENST00000327154 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
RPAIN-201ENST00000327154 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
RPAIN-201ENST00000327154 C10orf71Q711Q0 1435 aa18.92■□□□□ 0.62
RPAIN-201ENST00000327154 TJP1Q07157 1748 aa18.92■□□□□ 0.62
RPAIN-201ENST00000327154 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
RPAIN-201ENST00000327154 TM4SF1P30408 202 aa18.92■□□□□ 0.62
RPAIN-201ENST00000327154 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
RPAIN-201ENST00000327154 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
RPAIN-201ENST00000327154 KCPQ6ZWJ8 1503 aa18.91■□□□□ 0.62
RPAIN-201ENST00000327154 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
RPAIN-201ENST00000327154 ZNF790Q6PG37 636 aa18.91■□□□□ 0.62
RPAIN-201ENST00000327154 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
RPAIN-201ENST00000327154 ATP10DQ9P241 1426 aa18.91■□□□□ 0.62
RPAIN-201ENST00000327154 STARD3NLO95772 234 aa18.9■□□□□ 0.62
RPAIN-201ENST00000327154 KCNA3P22001 575 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms