RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
CHRNA3-201ENST00000326828 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
CHRNA3-201ENST00000326828 CHMLP26374 656 aa17.25■□□□□ 0.35
CHRNA3-201ENST00000326828 PPLO60437 1756 aa17.25■□□□□ 0.35
CHRNA3-201ENST00000326828 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 ATP2B3Q16720 1220 aa17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
CHRNA3-201ENST00000326828 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
CHRNA3-201ENST00000326828 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
CHRNA3-201ENST00000326828 GNAI2P04899 355 aa17.23■□□□□ 0.35
CHRNA3-201ENST00000326828 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
CHRNA3-201ENST00000326828 CAMK4Q16566 473 aa17.23■□□□□ 0.35
CHRNA3-201ENST00000326828 PYCARDQ9ULZ3 195 aa17.22■□□□□ 0.35
CHRNA3-201ENST00000326828 ABCC3O15438 1527 aa17.22■□□□□ 0.35
CHRNA3-201ENST00000326828 MCM2P49736 904 aa17.22■□□□□ 0.35
CHRNA3-201ENST00000326828 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
CHRNA3-201ENST00000326828 CUL4AQ13619 759 aa17.21■□□□□ 0.35
CHRNA3-201ENST00000326828 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.35
CHRNA3-201ENST00000326828 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
CHRNA3-201ENST00000326828 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
CHRNA3-201ENST00000326828 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
CHRNA3-201ENST00000326828 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.34
CHRNA3-201ENST00000326828 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.34
CHRNA3-201ENST00000326828 FERMT3Q86UX7 667 aa17.21■□□□□ 0.34
CHRNA3-201ENST00000326828 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.34
CHRNA3-201ENST00000326828 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 DNM1Q05193 864 aaKnown RBP17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 CWC27Q6UX04 472 aaKnown RBP17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
CHRNA3-201ENST00000326828 MLECQ14165 292 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 KIDINS220Q9ULH0 1771 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 CHL1O00533 1208 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 AP5Z1O43299 807 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 SYT1P21579 422 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 PDCL2Q8N4E4 241 aa17.19■□□□□ 0.34
CHRNA3-201ENST00000326828 KDM4AO75164 1064 aa17.18■□□□□ 0.34
CHRNA3-201ENST00000326828 AK2P54819 239 aa17.18■□□□□ 0.34
CHRNA3-201ENST00000326828 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
CHRNA3-201ENST00000326828 TCHHQ07283 1943 aa17.18■□□□□ 0.34
CHRNA3-201ENST00000326828 STX6O43752 255 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 RGS12O14924 1447 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 PTPRMP28827 1452 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 LARGE1O95461 756 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 ZSCAN22P10073 491 aaPredicted RBP17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 FAM184AQ8NB25 1140 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 PTPRCP08575 1304 aa17.17■□□□□ 0.34
CHRNA3-201ENST00000326828 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
CHRNA3-201ENST00000326828 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 PTGS1P23219 599 aa17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 DMTNQ08495 405 aa17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 NAA30Q147X3 362 aaPredicted RBP17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
CHRNA3-201ENST00000326828 UBE2HP62256 183 aa17.14■□□□□ 0.33
CHRNA3-201ENST00000326828 LRMPQ12912 555 aa17.14■□□□□ 0.33
CHRNA3-201ENST00000326828 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
CHRNA3-201ENST00000326828 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
CHRNA3-201ENST00000326828 LUZP1Q86V48 1076 aa17.14■□□□□ 0.33
CHRNA3-201ENST00000326828 GJB2P29033 226 aa17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 FLIIQ13045 1269 aa17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 F13A1P00488 732 aa17.13■□□□□ 0.33
CHRNA3-201ENST00000326828 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
CHRNA3-201ENST00000326828 UVSSAQ2YD98 709 aa17.12■□□□□ 0.33
CHRNA3-201ENST00000326828 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
CHRNA3-201ENST00000326828 KCNJ4P48050 445 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms