RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 DPEP1P16444 411 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 MAP2K1Q02750 393 aaPredicted RBP4.51□□□□□ -1.69
HIF1A-201ENST00000323441 AIDAQ96BJ3 306 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 PALLDQ8WX93 1383 aa4.51□□□□□ -1.69
HIF1A-201ENST00000323441 PRIM1P49642 420 aaKnown RBP4.5□□□□□ -1.69
HIF1A-201ENST00000323441 ARHGAP27Q6ZUM4 889 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 GCC1Q96CN9 775 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 TRAK1Q9UPV9 953 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 RGL3Q3MIN7 710 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 MCOLN1Q9GZU1 580 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 TTC21BQ7Z4L5 1316 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 L3MBTL3Q96JM7 780 aaPredicted RBP4.5□□□□□ -1.69
HIF1A-201ENST00000323441 RNF181Q9P0P0 153 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 MKRN1Q9UHC7 482 aaKnown RBP4.5□□□□□ -1.69
HIF1A-201ENST00000323441 CGNL1Q0VF96 1302 aa4.5□□□□□ -1.69
HIF1A-201ENST00000323441 CACNA1SQ13698 1873 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 A0A0G2JLW4 131 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 CCDC85CA6NKD9 419 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 NLRP6P59044 892 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 SCN7AQ01118 1682 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 LTBP3Q9NS15 1303 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 SLC4A1APQ9BWU0 796 aaKnown RBP4.49□□□□□ -1.69
HIF1A-201ENST00000323441 LAMB4A4D0S4 1761 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 TMEM88BA6NKF7 163 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 BCS1LQ9Y276 419 aa4.49□□□□□ -1.69
HIF1A-201ENST00000323441 WDR33Q9C0J8 1336 aaKnown RBP4.49□□□□□ -1.69
HIF1A-201ENST00000323441 KAT6BQ8WYB5 2073 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.48□□□□□ -1.69
HIF1A-201ENST00000323441 LMNB1P20700 586 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 HABP4Q5JVS0 413 aaKnown RBP4.48□□□□□ -1.69
HIF1A-201ENST00000323441 LINC00116Q8NCU8 138 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 PIM2Q9P1W9 311 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 FXR1P51114 621 aaKnown RBP eCLIP4.48□□□□□ -1.69
HIF1A-201ENST00000323441 NKX1-1Q15270 411 aaPredicted RBP4.48□□□□□ -1.69
HIF1A-201ENST00000323441 SBNO2Q9Y2G9 1366 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 FCHSD2O94868 740 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 MMP10P09238 476 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 LDHDQ86WU2 507 aa4.48□□□□□ -1.69
HIF1A-201ENST00000323441 RTL1A6NKG5 1358 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 CASP8AP2Q9UKL3 1982 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 CA12O43570 354 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 NPM3O75607 178 aaKnown RBP4.47□□□□□ -1.69
HIF1A-201ENST00000323441 PAPPA2Q9BXP8 1791 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 NFKBIEO00221 500 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 DALRD3Q5D0E6 543 aaKnown RBP4.47□□□□□ -1.69
HIF1A-201ENST00000323441 ANKRD24Q8TF21 1146 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 ZNF692Q9BU19 519 aaPredicted RBP4.47□□□□□ -1.69
HIF1A-201ENST00000323441 CCDC87Q9NVE4 849 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 UBR2Q8IWV8 1755 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 SNED1Q8TER0 1413 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 GYS1P13807 737 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 RC3H1Q5TC82 1133 aaKnown RBP4.47□□□□□ -1.69
HIF1A-201ENST00000323441 NLGN1Q8N2Q7 840 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 HHIPL1Q96JK4 782 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 RNF39Q9H2S5 420 aa4.47□□□□□ -1.69
HIF1A-201ENST00000323441 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.69
HIF1A-201ENST00000323441 POTEIP0CG38 1075 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 POTEJP0CG39 1038 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 SMARCC1Q92922 1105 aaPredicted RBP4.46□□□□□ -1.7
HIF1A-201ENST00000323441 MPHOSPH9Q99550 1183 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 MAP2K2P36507 400 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 IP6K1Q92551 441 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 AKAP11Q9UKA4 1901 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 SLX4Q8IY92 1834 aa4.46□□□□□ -1.7
HIF1A-201ENST00000323441 RASSF7Q02833 373 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 AK7Q96M32 723 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 KIF20BQ96Q89 1820 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 CSB-PGBD3P0DP91 1061 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 TM4SF1P30408 202 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 ITPK1Q13572 414 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 DEFB115Q30KQ5 88 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 ZCRB1Q8TBF4 217 aaKnown RBP4.45□□□□□ -1.7
HIF1A-201ENST00000323441 BRPF1P55201 1214 aaPredicted RBP4.45□□□□□ -1.7
HIF1A-201ENST00000323441 SMIM5Q71RC9 77 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 CABP1Q9NZU7 370 aa4.45□□□□□ -1.7
HIF1A-201ENST00000323441 EDC4Q6P2E9 1401 aaKnown RBP4.45□□□□□ -1.7
HIF1A-201ENST00000323441 TMF1P82094 1093 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 DDR1Q08345 913 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 PDE4DIPQ5VU43 2346 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 PCDH11XQ9BZA7 1347 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 PCDH11YQ9BZA8 1340 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 POLRMTO00411 1230 aaKnown RBP4.44□□□□□ -1.7
HIF1A-201ENST00000323441 TAF1DQ9H5J8 278 aaPredicted RBP4.44□□□□□ -1.7
HIF1A-201ENST00000323441 NLRP2Q9NX02 1062 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 TLL2Q9Y6L7 1015 aa4.44□□□□□ -1.7
HIF1A-201ENST00000323441 LOC102724428A0A0B4J2F2 783 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 DLL1O00548 723 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 SIK1P57059 783 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 KIF24Q5T7B8 1368 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
HIF1A-201ENST00000323441 PIGBQ92521 554 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 ARHGEF1Q92888 912 aaKnown RBP4.43□□□□□ -1.7
HIF1A-201ENST00000323441 SLC4A9Q96Q91 983 aa4.43□□□□□ -1.7
HIF1A-201ENST00000323441 TONSLQ96HA7 1378 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 MNX1P50219 401 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-201ENST00000323441 CAPNS2Q96L46 248 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 CABP2Q9NPB3 220 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 USP42Q9H9J4 1324 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms